SMTL ID : 9gvj.1

MUC5AC mucin amino acids 28 to 1483

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.178 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.178 NAG.2: 2 residues within 4Å: Chain A: A.496, N.497 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.496 Hydrogen bonds: A:N.497 NAG.3: 4 residues within 4Å: Chain A: T.381, Y.382, S.383, N.388 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.388 NAG.7: 2 residues within 4Å: Chain B: N.178, N.188 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.178 NAG.8: 3 residues within 4Å: Chain B: A.496, N.497, L.514 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:A.496 NAG.9: 2 residues within 4Å: Chain B: T.381, N.388 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.388

6 x CA: CALCIUM ION(Non-covalent)

CA.4: 6 residues within 4Å: Chain A: D.66, D.186, N.188, M.190, V.193, E.195 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.66, A:D.186, A:M.190, A:V.193, A:E.195 CA.5: 6 residues within 4Å: Chain A: D.419, N.546, N.548, I.550, D.553, D.554 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.419, A:I.550, A:D.553, A:D.554 CA.10: 6 residues within 4Å: Chain B: D.66, D.186, N.188, M.190, V.193, E.195 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.186, B:M.190, B:V.193, B:E.195 CA.11: 6 residues within 4Å: Chain B: D.419, N.546, N.548, I.550, D.553, D.554 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.419, B:I.550, B:D.553, B:D.554 CA.13: 6 residues within 4Å: Chain C: D.888, N.1011, D.1013, I.1015, N.1018, D.1019 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.888, C:D.1013, C:I.1015, C:D.1019 CA.14: 6 residues within 4Å: Chain D: D.888, N.1011, D.1013, I.1015, N.1018, D.1019 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.888, D:D.1013, D:I.1015, D:D.1019

2 x CU: COPPER (II) ION(Non-covalent)

CU.6: 4 residues within 4Å: Chain A: H.49, E.171, H.293, H.340 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.49, A:E.171, A:H.293, A:H.340 CU.12: 4 residues within 4Å: Chain B: H.49, E.171, H.293, H.340 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.49, B:E.171, B:H.293, B:H.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haberman, M. et al., MUC5AC Filaments Illuminate the Structural Diversification of Respiratory and Intestinal Mucins. To Be Published

Release Date

2024-12-04

Peptides

Mucin-5AC: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Mucin-5AC

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