SMTL ID : 9gvm.2 (1 other biounit)

NNMT-SAH IN COMPLEX WITH 20p

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 22 residues within 4Å: Chain A: Y.30, F.34, Y.39, Y.44, G.82, S.83, G.84, T.86, Y.88, Q.89, D.104, Y.105, S.106, N.109, C.160, D.161, V.162, T.182, L.183, C.184, A.188 Ligands: 01.2 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:Y.39, A:Y.44, A:T.86, A:Y.88, A:Y.105, A:S.106, A:N.109, A:D.161, A:D.161, A:V.162, A:T.182, A:T.182 Water bridges: A:T.182 pi-Stacking: A:Y.30

1 x 01: 1,4-dimethyl-6-(methylamino)pyridine-3-carboxamide

01.2: 11 residues within 4Å: Chain A: Y.39, Y.43, L.183, D.186, S.220, Y.222, Y.223, S.232, Y.261, A.266 Ligands: SAH.1 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.183, A:Y.223, A:Y.261, A:Y.261, A:A.266 Hydrogen bonds: A:Y.39, A:D.186, A:S.220, A:S.232, A:S.232 Water bridges: A:A.187 pi-Stacking: A:Y.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Akerud, T. et al., Mechanism and kinetics of turnover inhibitors of nicotinamide N-methyl transferase in vitro and in vivo. J.Biol.Chem. (2025)

Release Date

2025-05-14

Peptides

Nicotinamide N-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nicotinamide N-methyltransferase

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