SMTL ID : 9hap.1

Cryo-EM structure of inactive human arginine-vasopressin (AVP) V2 receptor (V2R) with tolvaptan

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 2.50 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x 01: (R)-Tolvaptan

01.1: 12 residues within 4Å: Chain D: Q.156, K.180, Q.183, M.184, Q.238, F.242, V.270, W.348, F.351, Q.355, M.375, S.379 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:Q.156, D:K.180, D:Q.183, D:W.348, D:Q.355 Hydrogen bonds: D:Q.156, D:K.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fouillen, A. et al., Inactive structures of the vasopressin V2 receptor reveal distinct binding modes for Tolvaptan and Mambaquaretin toxin. Nat Commun (2025)

Release Date

2025-06-04

Peptides

Synthetic antibody, anti-BRIL Fab fragment, Heavy chain: A
anti-BRIL Fab Nanobody: B
Synthetic antibody, anti-BRIL Fab fragment, Light chain: C
Vasopressin V2 receptor,Soluble cytochrome b562: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
K

C
L

D
R

Membrane

We predict this structure to be a membrane protein.
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Synthetic antibody, anti-BRIL Fab fragment, Heavy chain

anti-BRIL Fab Nanobody

Synthetic antibody, anti-BRIL Fab fragment, Light chain

Vasopressin V2 receptor,Soluble cytochrome b562

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