SMTL ID : 9hdq.1

The Human LINE-1 ORF2p target-primed reverse transcription complex with the fingers domain in an open conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 2.45 Å

Oligo State

monomer

Ligands

1 x DA- DA- DA- DA: Unassigned Nucleic Acid(Non-covalent)

DA-DA-DA-DA.1: 13 residues within 4Å: Chain A: S.884, R.885, W.887, F.888, I.892, N.893, R.897, P.898, L.899, R.901, L.902, P.1325 Chain E: A.26 6 PLIP interactions: 6 interactions with chain A Salt bridges: A:K.1336, A:K.991, A:K.991 Hydrogen bonds: A:S.992, A:S.992, A:R.1053, A:R.1053

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.1652, C.1656, H.1664, C.1669 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.1652, A:C.1656, A:H.1664, A:C.1669

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghanim, G.E. et al., Structural mechanism of LINE-1 target-primed reverse transcription. Science (2025)

Release Date

2025-03-12

Peptides

LINE-1 retrotransposable element ORF2 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LINE-1 retrotransposable element ORF2 protein

Related Entries With Identical Sequence