SMTL ID : 9hpe.1

The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.43, T.45, E.46 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.43, A:E.46 NAG.2: 5 residues within 4Å: Chain A: R.196, G.222, H.224, N.246 Chain B: K.468 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:H.224 Hydrogen bonds: B:K.468, B:K.468 NAG.3: 4 residues within 4Å: Chain B: Q.342, Q.351, N.360, Y.382 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:N.360 Hydrogen bonds: B:Q.342, B:Q.351, B:N.360 NAG.4: 3 residues within 4Å: Chain B: G.222, H.224, N.246 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.224, B:N.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pokharna, A. et al., Architecture, dynamics and biogenesis of GluA3 AMPA glutamate receptors. Nature (2025)

Release Date

2025-07-09

Peptides

Isoform Flip of Glutamate receptor 3,Voltage-dependent calcium channel gamma-2 subunit: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Isoform Flip of Glutamate receptor 3,Voltage-dependent calcium channel gamma-2 subunit

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