SMTL ID : 9i20.1

Cryo-EM structure of human SLC35B1 with ADP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 14 residues within 4Å: Chain A: Y.25, Y.94, K.120, Q.190, M.204, M.205, Q.254, I.257, V.261, P.266, C.269, S.270, T.273, K.277 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.190 Salt bridges: A:K.120, A:K.120, A:K.277, A:K.277

1 x PEV: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE(Non-covalent)

PEV.2: 14 residues within 4Å: Chain A: L.53, L.95, G.96, V.99, S.100, S.103, Q.106, F.107, Y.171, L.174, L.175, L.177, L.178, L.182 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.171, A:L.175, A:L.178 Hydrogen bonds: A:Q.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gulati, A. et al., Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1. To Be Published

Release Date

2025-05-21

Peptides

Solute carrier family 35 member B1: A
Maltodextrin-binding protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Solute carrier family 35 member B1

Maltodextrin-binding protein

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