SMTL ID : 9ilf.2 (1 other biounit)

Crystal structure of human malectin in complex with nigerose.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 10 residues within 4Å: Chain A: S.39, Y.41, E.61, Y.63, V.89, Y.90, K.97, D.160, N.161, K.163 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.39, A:S.39, A:E.61, A:K.97, A:K.97, A:N.161 Water bridges: A:K.163, A:K.163

1 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)

DIO.2: 3 residues within 4Å: Chain A: W.9, A.10, R.27 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.10

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 6 residues within 4Å: Chain A: E.32, G.33, G.36, R.37, A.38, R.62 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.33, A:A.38 Water bridges: A:R.62 Salt bridges: A:R.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Si, Y.L., The Structural Basis of Human Malectin Recognition of Ligands. To Be Published

Release Date

2025-07-02

Peptides

Malectin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Malectin

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