SMTL ID : 9imq.1

Crystal structure of a C45 isoprenyl diphosphate synthase, Rv0562 from Mycobacterium tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

homo-dimer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: I.172, E.173, R.257 No protein-ligand interaction detected (PLIP) MG.2: 4 residues within 4Å: Chain A: V.7, V.8, R.23, R.58 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:V.8 MG.3: 3 residues within 4Å: Chain A: K.57, H.90, R.107 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Q. et al., Structural insight of a bi-functional isoprenyl diphosphate synthase Rv0562 from Mycobacterium tuberculosis. Int.J.Biol.Macromol. (2025)

Release Date

2025-07-09

Peptides

Nonaprenyl diphosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nonaprenyl diphosphate synthase

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