SMTL ID : 9ium.1

The structure of Candida albicans Cdr1 in milbemycin oxime-inhibited state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x 01: Pip2(20:4/18:0)

01.1: 13 residues within 4Å: Chain A: L.602, G.623, R.624, F.626, F.627, W.629, L.630, I.633, F.637, H.706, N.758, K.761, W.762 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.602, A:F.627, A:W.629, A:L.630, A:I.633, A:I.633, A:F.637, A:W.762 Hydrogen bonds: A:N.758 Salt bridges: A:R.624, A:H.706, A:K.761, A:K.761, A:K.761

1 x 02: milbemycin oxime

02.2: 26 residues within 4Å: Chain A: F.517, S.518, G.521, Q.522, M.525, F.552, L.555, F.556, F.559, S.560, L.562, L.563, M.657, T.661, L.664, L.665, V.668, F.1233, I.1237, N.1240, T.1241, N.1348, T.1351, L.1352, T.1355, L.1358 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.556, A:F.556, A:F.556, A:F.559, A:L.664, A:T.1351, A:L.1352, A:T.1355 Hydrogen bonds: A:T.661, A:I.1237

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peng, Y. et al., Cryo-EM structures of Candida albicans Cdr1 reveal azole-substrate recognition and inhibitor blocking mechanisms. Nat Commun (2024)

Release Date

2024-09-18

Peptides

Pleiotropic ABC efflux transporter of multiple drugs CDR1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Pleiotropic ABC efflux transporter of multiple drugs CDR1

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