SMTL ID : 9iwx.1

Crystal structure of the mouse RIP3 kinase domain(R69H) in complexed with GSK'872

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

2 x 01: ~{N}-(6-propan-2-ylsulfonylquinolin-4-yl)-1,3-benzothiazol-5-amine

01.1: 17 residues within 4Å: Chain A: V.28, G.29, V.36, A.49, K.51, E.61, M.65, L.74, L.93, T.95, R.96, F.97, M.98, S.102, S.147, L.150, D.161 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.51, A:L.74, A:T.95, A:F.97, A:L.150 Hydrogen bonds: A:K.51, A:M.98, A:D.161 pi-Cation interactions: A:K.51 01.2: 19 residues within 4Å: Chain B: V.28, G.29, V.36, A.49, K.51, E.61, M.65, L.74, L.93, T.95, R.96, F.97, M.98, G.101, S.102, S.147, L.150, A.160, D.161 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:V.36, B:K.51, B:L.74, B:T.95, B:F.97, B:L.150 Hydrogen bonds: B:K.51, B:M.98, B:D.161 pi-Cation interactions: B:K.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, H. et al., Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro. Nat Commun (2025)

Release Date

2025-05-07

Peptides

Receptor-interacting serine/threonine-protein kinase 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 3

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