SMTL ID : 9ixl.2 (1 other biounit)

Crystal structure of the CYP153A double mutant L354T/V456G from Marinobacter aquaeolei

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 29 residues within 4Å: Chain A: D.120, F.146, I.147, H.154, R.158, L.305, L.306, G.309, G.310, T.313, T.314, S.317, P.355, M.359, R.361, Y.384, S.412, F.413, G.414, Y.415, V.417, H.418, R.419, C.420, M.421, G.422, L.425, A.426 Ligands: DAO.2 21 PLIP interactions: 20 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:F.146, A:I.147, A:I.147, A:L.305, A:L.306, A:T.313, A:P.355, A:Y.384, A:F.413, A:M.421, A:L.425, A:A.426 Hydrogen bonds: A:Y.415 Water bridges: A:R.361, A:H.418 Salt bridges: A:H.154, A:R.158, A:R.361, A:H.418 Metal complexes: A:C.420, H2O.1

1 x DAO: LAURIC ACID(Non-covalent)

DAO.2: 10 residues within 4Å: Chain A: Q.131, P.137, M.145, I.147, M.230, V.308, T.313, T.356, M.359 Ligands: HEM.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.137, A:I.147

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: R.112, R.392 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.112, A:R.112, A:R.392, A:R.392 GOL.4: 4 residues within 4Å: Chain A: D.69, D.71, N.101 Ligands: GOL.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.69, A:D.69, A:D.71, A:D.71, A:N.101 GOL.5: 8 residues within 4Å: Chain A: P.60, L.65, D.69, I.70, D.71, N.74, Y.86 Ligands: GOL.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.69, A:D.71, A:D.71, A:N.74, A:Y.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qin, M.M. et al., Structure of the CYP153A double mutant L354T/V456G from Marinobacter aquaeolei at 2.10 Angstroms resolution. To Be Published

Release Date

2025-08-06

Peptides

Cytochrome P450: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450

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