SMTL ID : 9iyv.1

ChCODH2 WT in 2hour air exposure condition

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 12 residues within 4Å: Chain A: C.68, R.69, H.70, C.71, Q.73, G.74, C.76, G.88, I.89, C.90, R.100, M.219 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.68, A:C.71, A:C.76, A:C.90 SF4.6: 12 residues within 4Å: Chain B: C.68, R.69, H.70, C.71, Q.73, G.74, C.76, G.88, I.89, C.90, R.100, M.219 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.68, B:C.71, B:C.76, B:C.90

8 x FE: FE (III) ION(Non-covalent)

FE.2: 5 residues within 4Å: Chain A: H.281, C.315 Ligands: FE.3, FE.4, FE.5 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.281, A:C.315 FE.3: 5 residues within 4Å: Chain A: C.353, C.466 Ligands: FE.2, FE.4, FE.5 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.353 FE.4: 4 residues within 4Å: Chain A: C.314, C.496 Ligands: FE.2, FE.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:C.314, A:C.496 FE.5: 5 residues within 4Å: Chain A: H.281, C.546, K.583 Ligands: FE.2, FE.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.546 FE.7: 5 residues within 4Å: Chain B: H.281, C.315 Ligands: FE.8, FE.9, FE.10 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.281, B:C.315 FE.8: 5 residues within 4Å: Chain B: C.353, C.466 Ligands: FE.7, FE.9, FE.10 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.353 FE.9: 4 residues within 4Å: Chain B: C.314, C.496 Ligands: FE.7, FE.8 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:C.314, B:C.496 FE.10: 5 residues within 4Å: Chain B: H.281, C.546, K.583 Ligands: FE.7, FE.8 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.546

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kong, S.Y. et al., Air-viable, rapid CO dehydrogenase with a selectively sealed tunnel. To Be Published

Release Date

2025-08-06

Peptides

Carbon monoxide dehydrogenase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Carbon monoxide dehydrogenase 2

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