SMTL ID : 9j3c.1

Cryo-EM structure of NAT10 with Co-enzyme A

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x COA: COENZYME A(Non-covalent)

COA.1: 14 residues within 4Å: Chain A: S.536, I.629, V.631, Q.636, G.637, G.639, Y.640, G.641, S.642, R.718, L.719, F.722, W.723, R.725 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Q.636, A:F.722 Hydrogen bonds: A:Q.636, A:G.637, A:G.639, A:G.641, A:S.642, A:S.642, A:R.718, A:R.718 Salt bridges: A:R.725 pi-Cation interactions: A:R.718 COA.2: 17 residues within 4Å: Chain B: S.536, V.627, I.629, V.631, Q.636, G.637, M.638, G.639, Y.640, G.641, S.642, Y.713, R.718, L.719, K.721, F.722, R.725 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:I.629, B:L.719 Hydrogen bonds: B:I.629, B:Q.636, B:Q.636, B:G.637, B:G.639, B:Y.640, B:G.641, B:S.642, B:R.718, B:R.718 Salt bridges: B:R.725 pi-Cation interactions: B:R.718, B:R.718

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Z. et al., Targeting NAT10 attenuates homologous recombination via destabilizing DNA:RNA hybrids and overcomes PARP inhibitor resistance in cancers. Drug Resist Updat. (2025)

Release Date

2025-04-23

Peptides

RNA cytidine acetyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RNA cytidine acetyltransferase