SMTL ID : 9j9k.1 (1 other biounit)

Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin and UDP2F glucose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

monomer

Ligands

1 x T83: 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one(Non-covalent)

T83.1: 10 residues within 4Å: Chain A: H.16, F.85, I.117, F.118, H.137, T.143, V.182, D.183, Y.196, A.389 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.85, A:V.182, A:V.182, A:Y.196, A:A.389 Hydrogen bonds: A:H.16, A:Y.196 Salt bridges: A:H.137

1 x U2F: URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE(Non-covalent)

U2F.2: 22 residues within 4Å: Chain A: G.15, I.18, P.138, R.247, S.273, G.275, S.276, G.277, Y.315, W.348, A.349, Q.351, H.366, G.368, W.369, N.370, S.371, E.374, H.388, A.389, E.390, Q.391 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:G.15, A:P.138, A:T.139, A:R.247, A:R.247, A:S.276, A:G.277, A:Y.315, A:A.349, A:A.349, A:W.369, A:N.370, A:N.370, A:S.371, A:E.390, A:E.390, A:Q.391 Salt bridges: A:H.16, A:H.366, A:H.366 pi-Stacking: A:W.348

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liao, J. et al., beta-Carotene alleviates substrate inhibition caused by asymmetric cooperativity. Nat Commun (2025)

Release Date

2024-09-04

Peptides

Glycosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycosyltransferase

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