SMTL ID : 9jd3.1

membrane proteins

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

3 x D12: DODECANE(Non-covalent)(Covalent)

D12.1: 3 residues within 4Å: Chain A: Y.125, S.552, L.559 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.559 D12.12: 4 residues within 4Å: Chain A: F.477, W.481, I.482, K.577 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.477, A:W.481, A:K.577 D12.14: 1 residues within 4Å: Chain A: F.572 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.572, A:F.572

1 x LNK: PENTANE(Non-covalent)

LNK.2: 4 residues within 4Å: Chain A: V.136, I.438, S.439, L.442 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.136, A:I.438, A:L.442

4 x OCT: N-OCTANE(Non-covalent)

OCT.3: 3 residues within 4Å: Chain A: V.128, V.129, S.132 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.128, A:V.129 OCT.4: 6 residues within 4Å: Chain A: N.540, I.543, G.544, W.547 Ligands: OCT.5, D10.13 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.543, A:W.547 OCT.5: 2 residues within 4Å: Chain A: Y.527 Ligands: OCT.4 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.527 OCT.11: 2 residues within 4Å: Chain A: F.150, Q.154 No protein-ligand interaction detected (PLIP)

2 x D10: DECANE(Non-covalent)

D10.6: 3 residues within 4Å: Chain A: F.88, Y.323 Ligands: HEX.8 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.88 D10.13: 3 residues within 4Å: Chain A: L.545, W.547 Ligands: OCT.4 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.547

7 x HEX: HEXANE(Non-covalent)(Non-functional Binders)

HEX.7: 3 residues within 4Å: Chain A: F.88, W.503, I.511 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.88, A:I.511 HEX.8: 4 residues within 4Å: Chain A: I.85, F.88 Ligands: D10.6, HEX.9 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.85, A:F.88 HEX.9: 1 residues within 4Å: Ligands: HEX.8 No protein-ligand interaction detected (PLIP) HEX.10: 4 residues within 4Å: Chain A: V.262, R.263, T.266, M.381 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.262, A:T.266 HEX.15: 2 residues within 4Å: Chain A: L.265, T.266 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.266 HEX.16: 1 residues within 4Å: Chain A: L.265 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.265 HEX.17: 5 residues within 4Å: Chain A: L.257, L.258, L.332, T.336, V.339 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.257, A:L.258, A:L.332, A:V.339

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.18: 3 residues within 4Å: Chain A: D.211, P.213, W.541 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.211, A:W.541

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.19: 5 residues within 4Å: Chain A: N.63, Y.83, Q.297, S.301, S.337 Ligand excluded by PLIP

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.20: 2 residues within 4Å: Chain A: T.189, N.190 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Dimerization and substrate recognition of human taurine transporter. Nat Commun (2025)

Release Date

2025-07-16

Peptides

Sodium- and chloride-dependent taurine transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sodium- and chloride-dependent taurine transporter

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