SMTL ID : 9jkp.1

Crystal structure of the Staphylococcus aureus GTPase Era in complex with GDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: P.16, N.17, V.18, G.19, K.20, S.21, T.22, N.123, K.124, D.126, L.127, S.153, A.154, L.155, E.156 Ligands: MG.2 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:N.17, A:V.18, A:G.19, A:K.20, A:S.21, A:S.21, A:S.21, A:T.22, A:T.22, A:N.123, A:K.124, A:K.124, A:S.153, A:A.154, A:L.155 Salt bridges: A:K.20, A:D.126

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 1 residues within 4Å: Ligands: GDP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klochkova, E. et al., Crystal structure of the GDP-bound GTPase Era from Staphylococcus aureus. Biochem.Biophys.Res.Commun. (2024)

Release Date

2024-12-18

Peptides

GTPase Era: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

GTPase Era