SMTL ID : 9jrp.1 (1 other biounit)

Crystal structure of Aldo-keto reductase 1C3 complexed with compound VS-9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

monomer

Ligands

1 x 01: 5-[[3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)propanoyl-methyl-amino]methyl]-2-methyl-furan-3-carboxylic acid

01.1: 16 residues within 4Å: Chain A: Y.30, L.60, Y.61, W.92, H.123, S.124, N.173, Y.222, W.233, F.312, N.313, S.314, S.316, F.317, H.320 Ligands: NAP.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.30, A:L.60, A:W.233, A:F.312, A:F.312, A:N.313 Hydrogen bonds: A:Y.61 Salt bridges: A:K.90, A:H.123 pi-Stacking: A:F.312

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 30 residues within 4Å: Chain A: G.28, T.29, Y.30, D.56, Y.61, K.90, H.123, S.172, N.173, Q.196, Y.222, S.223, A.224, L.225, G.226, S.227, Q.228, L.242, A.259, L.274, A.275, K.276, S.277, Y.278, N.279, R.282, Q.285, N.286, F.312 Ligands: 01.1 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:F.312 Hydrogen bonds: A:T.29, A:Y.30, A:D.56, A:D.56, A:S.172, A:N.173, A:N.173, A:S.223, A:L.225, A:S.227, A:Q.228, A:Q.228, A:K.276, A:Y.278, A:Q.285, A:N.286 Water bridges: A:S.223, A:A.224, A:A.224, A:S.227, A:T.257, A:R.282, A:Q.285, A:Q.285 Salt bridges: A:K.276, A:R.282 pi-Stacking: A:Y.222 pi-Cation interactions: A:R.282

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, J. et al., Crystal structure of Aldo-keto reductase 1C3 complexed with compound VS-9. To Be Published

Release Date

2025-10-01

Peptides

Aldo-keto reductase family 1 member C3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aldo-keto reductase family 1 member C3

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