SMTL ID : 9jta.1

Crystal structure of RNF213 RING domain bound to IpaH1.4 LRR domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.23, H.25, C.43, C.46 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.23, B:H.25, B:C.43, B:C.46 ZN.2: 4 residues within 4Å: Chain B: C.8, C.11, C.28, C.31 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.8, B:C.11, B:C.28, B:C.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, X. et al., Shigella effector IpaH1.4 subverts host E3 ligase RNF213 to evade antibacterial immunity. Nat Commun (2025)

Release Date

2025-05-07

Peptides

RING-type E3 ubiquitin transferase: A
E3 ubiquitin-protein ligase RNF213: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

RING-type E3 ubiquitin transferase

E3 ubiquitin-protein ligase RNF213