SMTL ID : 9k0i.1

Crystal structure of FGFR4 kinase domain with 32a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

monomer

Ligands

1 x 01: (2~{S})-~{N}-[2-[[5-[(1~{R})-1-[3,5-bis(chloranyl)pyridin-4-yl]ethoxy]-1~{H}-indazol-3-yl]amino]-3-fluoranyl-5-(4-morpholin-4-ylpiperidin-1-yl)phenyl]-2-cyano-3-cyclopropyl-propanamide

01.1: 15 residues within 4Å: Chain A: L.31, V.39, R.41, V.58, A.59, K.61, E.109, C.110, A.111, G.114, N.115, R.174, L.177, D.188 Ligands: SO4.8 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.31, A:L.31, A:V.39, A:R.41, A:L.177 Hydrogen bonds: A:R.41, A:E.109, A:A.111, A:A.111, A:A.111, A:N.115 Halogen bonds: A:L.31, A:D.188

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.174, T.204, N.206, R.208 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.204, A:T.204, A:N.206, A:N.206 Water bridges: A:N.115 Salt bridges: A:R.174 SO4.3: 4 residues within 4Å: Chain A: R.265, W.284, H.285, A.286 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.265, A:A.286 Water bridges: A:R.281, A:A.287 Salt bridges: A:H.285 SO4.4: 5 residues within 4Å: Chain A: R.117, R.121, R.124, G.245, S.246 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.117, A:R.124, A:R.124, A:S.246, A:S.246 Salt bridges: A:R.121 SO4.5: 4 residues within 4Å: Chain A: R.22, L.25, L.27, Y.105 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.25 Water bridges: A:R.22, A:L.27, A:L.27, A:Y.105 SO4.6: 3 residues within 4Å: Chain A: L.17, W.18, L.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.17 SO4.7: 3 residues within 4Å: Chain A: R.117, E.118, N.206 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.206 Water bridges: A:R.121, A:R.121 Salt bridges: A:R.117, A:R.121 SO4.8: 3 residues within 4Å: Chain A: E.118, N.206 Ligands: 01.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.206, A:N.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X.J. et al., Crystal structure of FGFR4 kinase domain with 32a. To Be Published

Release Date

2025-10-22

Peptides

Fibroblast growth factor receptor 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fibroblast growth factor receptor 4

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