SMTL ID : 9kly.1

Crystal Structure of the bromodomain of human BRD9 in complex with the inhibitor Y22032

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x 01: 1-[1-[2,5-dimethoxy-4-[(1~{S})-1-oxidanylethyl]phenyl]indolizin-3-yl]ethanone

01.1: 10 residues within 4Å: Chain A: H.48, F.50, F.51, F.53, P.54, V.55, I.59, A.60, N.106, Y.112 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.50, A:F.51, A:V.55, A:I.59, A:A.60, A:Y.112 Hydrogen bonds: A:N.106 pi-Stacking: A:Y.112, A:Y.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Z. et al., Key imidazolyl groups that induce phenylalanine flipping enhance the efficacy of oral BRD9 inhibitors for AML treatment. Acta Pharm Sin B (2025)

Release Date

2025-11-05

Peptides

Bromodomain-containing protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 9

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