SMTL ID : 9knz.1

ERDRP-0519-bound Nipah virus L-P complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-4-mer

Ligands

1 x 01: 2-methyl-~{N}-[4-[(2~{S})-2-(2-morpholin-4-ylethyl)piperidin-1-yl]sulfonylphenyl]-5-(trifluoromethyl)pyrazole-3-carboxamide

01.1: 12 residues within 4Å: Chain A: L.723, W.730, E.799, G.800, Q.803, W.806, T.810, L.814, G.831, E.834, L.870, H.875 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.806 Hydrogen bonds: A:E.799, A:G.800, A:T.810 Salt bridges: A:E.799, A:E.799 pi-Stacking: A:F.726

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.1191, E.1223, C.1428, C.1429 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.1191, A:E.1223, A:C.1428, A:C.1429 ZN.3: 4 residues within 4Å: Chain A: C.1236, C.1239, H.1421, H.1423 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.1236, A:H.1421, A:H.1423

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., Structures of the measles virus polymerase complex with non-nucleoside inhibitors and mechanism of inhibition. Cell (2025)

Release Date

2025-07-16

Peptides

RNA-directed RNA polymerase L: A
Phosphoprotein: BCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

RNA-directed RNA polymerase L

Phosphoprotein

Related Entries With Identical Sequence