SMTL ID : 9kp5.1

Crystal structure of Horse spleen L-ferritin mutant (E56F/R59F)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-24-mer

Ligands

168 x CD: CADMIUM ION(Non-covalent)

CD.1: 3 residues within 4Å: Chain A: D.38, C.48 Ligands: EDO.12 Ligand excluded by PLIP CD.2: 2 residues within 4Å: Chain A: D.80 Ligands: CL.10 Ligand excluded by PLIP CD.3: 8 residues within 4Å: Chain A: D.127, S.131 Chain E: D.127, S.131 Chain I: D.127, S.131 Ligands: CD.55, CD.107 Ligand excluded by PLIP CD.4: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.5, CD.56, CD.57, CD.108, CD.109 Ligand excluded by PLIP CD.5: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.4, CD.56, CD.57, CD.108, CD.109 Ligand excluded by PLIP CD.6: 1 residues within 4Å: Chain A: H.132 Ligand excluded by PLIP CD.7: 2 residues within 4Å: Chain A: E.60, E.63 Ligand excluded by PLIP CD.14: 3 residues within 4Å: Chain B: D.38, C.48 Ligands: EDO.25 Ligand excluded by PLIP CD.15: 2 residues within 4Å: Chain B: D.80 Ligands: CL.23 Ligand excluded by PLIP CD.16: 8 residues within 4Å: Chain B: D.127, S.131 Chain G: D.127, S.131 Chain L: D.127, S.131 Ligands: CD.81, CD.146 Ligand excluded by PLIP CD.17: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.18, CD.82, CD.83, CD.147, CD.148 Ligand excluded by PLIP CD.18: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.82, CD.83, CD.147, CD.148 Ligand excluded by PLIP CD.19: 1 residues within 4Å: Chain B: H.132 Ligand excluded by PLIP CD.20: 2 residues within 4Å: Chain B: E.60, E.63 Ligand excluded by PLIP CD.27: 3 residues within 4Å: Chain C: D.38, C.48 Ligands: EDO.38 Ligand excluded by PLIP CD.28: 2 residues within 4Å: Chain C: D.80 Ligands: CL.36 Ligand excluded by PLIP CD.29: 8 residues within 4Å: Chain C: D.127, S.131 Chain H: D.127, S.131 Chain J: D.127, S.131 Ligands: CD.94, CD.120 Ligand excluded by PLIP CD.30: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.31, CD.95, CD.96, CD.121, CD.122 Ligand excluded by PLIP CD.31: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.30, CD.95, CD.96, CD.121, CD.122 Ligand excluded by PLIP CD.32: 1 residues within 4Å: Chain C: H.132 Ligand excluded by PLIP CD.33: 2 residues within 4Å: Chain C: E.60, E.63 Ligand excluded by PLIP CD.40: 3 residues within 4Å: Chain D: D.38, C.48 Ligands: EDO.51 Ligand excluded by PLIP CD.41: 2 residues within 4Å: Chain D: D.80 Ligands: CL.49 Ligand excluded by PLIP CD.42: 8 residues within 4Å: Chain D: D.127, S.131 Chain F: D.127, S.131 Chain K: D.127, S.131 Ligands: CD.68, CD.133 Ligand excluded by PLIP CD.43: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.44, CD.69, CD.70, CD.134, CD.135 Ligand excluded by PLIP CD.44: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.43, CD.69, CD.70, CD.134, CD.135 Ligand excluded by PLIP CD.45: 1 residues within 4Å: Chain D: H.132 Ligand excluded by PLIP CD.46: 2 residues within 4Å: Chain D: E.60, E.63 Ligand excluded by PLIP CD.53: 3 residues within 4Å: Chain E: D.38, C.48 Ligands: EDO.64 Ligand excluded by PLIP CD.54: 2 residues within 4Å: Chain E: D.80 Ligands: CL.62 Ligand excluded by PLIP CD.55: 8 residues within 4Å: Chain A: D.127, S.131 Chain E: D.127, S.131 Chain I: D.127, S.131 Ligands: CD.3, CD.107 Ligand excluded by PLIP CD.56: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.4, CD.5, CD.57, CD.108, CD.109 Ligand excluded by PLIP CD.57: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.4, CD.5, CD.56, CD.108, CD.109 Ligand excluded by PLIP CD.58: 1 residues within 4Å: Chain E: H.132 Ligand excluded by PLIP CD.59: 2 residues within 4Å: Chain E: E.60, E.63 Ligand excluded by PLIP CD.66: 3 residues within 4Å: Chain F: D.38, C.48 Ligands: EDO.77 Ligand excluded by PLIP CD.67: 2 residues within 4Å: Chain F: D.80 Ligands: CL.75 Ligand excluded by PLIP CD.68: 8 residues within 4Å: Chain D: D.127, S.131 Chain F: D.127, S.131 Chain K: D.127, S.131 Ligands: CD.42, CD.133 Ligand excluded by PLIP CD.69: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.43, CD.44, CD.70, CD.134, CD.135 Ligand excluded by PLIP CD.70: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.43, CD.44, CD.69, CD.134, CD.135 Ligand excluded by PLIP CD.71: 1 residues within 4Å: Chain F: H.132 Ligand excluded by PLIP CD.72: 2 residues within 4Å: Chain F: E.60, E.63 Ligand excluded by PLIP CD.79: 3 residues within 4Å: Chain G: D.38, C.48 Ligands: EDO.90 Ligand excluded by PLIP CD.80: 2 residues within 4Å: Chain G: D.80 Ligands: CL.88 Ligand excluded by PLIP CD.81: 8 residues within 4Å: Chain B: D.127, S.131 Chain G: D.127, S.131 Chain L: D.127, S.131 Ligands: CD.16, CD.146 Ligand excluded by PLIP CD.82: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.18, CD.83, CD.147, CD.148 Ligand excluded by PLIP CD.83: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.18, CD.82, CD.147, CD.148 Ligand excluded by PLIP CD.84: 1 residues within 4Å: Chain G: H.132 Ligand excluded by PLIP CD.85: 2 residues within 4Å: Chain G: E.60, E.63 Ligand excluded by PLIP CD.92: 3 residues within 4Å: Chain H: D.38, C.48 Ligands: EDO.103 Ligand excluded by PLIP CD.93: 2 residues within 4Å: Chain H: D.80 Ligands: CL.101 Ligand excluded by PLIP CD.94: 8 residues within 4Å: Chain C: D.127, S.131 Chain H: D.127, S.131 Chain J: D.127, S.131 Ligands: CD.29, CD.120 Ligand excluded by PLIP CD.95: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.30, CD.31, CD.96, CD.121, CD.122 Ligand excluded by PLIP CD.96: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.30, CD.31, CD.95, CD.121, CD.122 Ligand excluded by PLIP CD.97: 1 residues within 4Å: Chain H: H.132 Ligand excluded by PLIP CD.98: 2 residues within 4Å: Chain H: E.60, E.63 Ligand excluded by PLIP CD.105: 3 residues within 4Å: Chain I: D.38, C.48 Ligands: EDO.116 Ligand excluded by PLIP CD.106: 2 residues within 4Å: Chain I: D.80 Ligands: CL.114 Ligand excluded by PLIP CD.107: 8 residues within 4Å: Chain A: D.127, S.131 Chain E: D.127, S.131 Chain I: D.127, S.131 Ligands: CD.3, CD.55 Ligand excluded by PLIP CD.108: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.4, CD.5, CD.56, CD.57, CD.109 Ligand excluded by PLIP CD.109: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.4, CD.5, CD.56, CD.57, CD.108 Ligand excluded by PLIP CD.110: 1 residues within 4Å: Chain I: H.132 Ligand excluded by PLIP CD.111: 2 residues within 4Å: Chain I: E.60, E.63 Ligand excluded by PLIP CD.118: 3 residues within 4Å: Chain J: D.38, C.48 Ligands: EDO.129 Ligand excluded by PLIP CD.119: 2 residues within 4Å: Chain J: D.80 Ligands: CL.127 Ligand excluded by PLIP CD.120: 8 residues within 4Å: Chain C: D.127, S.131 Chain H: D.127, S.131 Chain J: D.127, S.131 Ligands: CD.29, CD.94 Ligand excluded by PLIP CD.121: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.30, CD.31, CD.95, CD.96, CD.122 Ligand excluded by PLIP CD.122: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.30, CD.31, CD.95, CD.96, CD.121 Ligand excluded by PLIP CD.123: 1 residues within 4Å: Chain J: H.132 Ligand excluded by PLIP CD.124: 2 residues within 4Å: Chain J: E.60, E.63 Ligand excluded by PLIP CD.131: 3 residues within 4Å: Chain K: D.38, C.48 Ligands: EDO.142 Ligand excluded by PLIP CD.132: 2 residues within 4Å: Chain K: D.80 Ligands: CL.140 Ligand excluded by PLIP CD.133: 8 residues within 4Å: Chain D: D.127, S.131 Chain F: D.127, S.131 Chain K: D.127, S.131 Ligands: CD.42, CD.68 Ligand excluded by PLIP CD.134: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.43, CD.44, CD.69, CD.70, CD.135 Ligand excluded by PLIP CD.135: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.43, CD.44, CD.69, CD.70, CD.134 Ligand excluded by PLIP CD.136: 1 residues within 4Å: Chain K: H.132 Ligand excluded by PLIP CD.137: 2 residues within 4Å: Chain K: E.60, E.63 Ligand excluded by PLIP CD.144: 3 residues within 4Å: Chain L: D.38, C.48 Ligands: EDO.155 Ligand excluded by PLIP CD.145: 2 residues within 4Å: Chain L: D.80 Ligands: CL.153 Ligand excluded by PLIP CD.146: 8 residues within 4Å: Chain B: D.127, S.131 Chain G: D.127, S.131 Chain L: D.127, S.131 Ligands: CD.16, CD.81 Ligand excluded by PLIP CD.147: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.18, CD.82, CD.83, CD.148 Ligand excluded by PLIP CD.148: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.18, CD.82, CD.83, CD.147 Ligand excluded by PLIP CD.149: 1 residues within 4Å: Chain L: H.132 Ligand excluded by PLIP CD.150: 2 residues within 4Å: Chain L: E.60, E.63 Ligand excluded by PLIP CD.157: 3 residues within 4Å: Chain M: D.38, C.48 Ligands: EDO.168 Ligand excluded by PLIP CD.158: 2 residues within 4Å: Chain M: D.80 Ligands: CL.166 Ligand excluded by PLIP CD.159: 8 residues within 4Å: Chain M: D.127, S.131 Chain Q: D.127, S.131 Chain U: D.127, S.131 Ligands: CD.211, CD.263 Ligand excluded by PLIP CD.160: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.161, CD.212, CD.213, CD.264, CD.265 Ligand excluded by PLIP CD.161: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.160, CD.212, CD.213, CD.264, CD.265 Ligand excluded by PLIP CD.162: 1 residues within 4Å: Chain M: H.132 Ligand excluded by PLIP CD.163: 2 residues within 4Å: Chain M: E.60, E.63 Ligand excluded by PLIP CD.170: 3 residues within 4Å: Chain N: D.38, C.48 Ligands: EDO.181 Ligand excluded by PLIP CD.171: 2 residues within 4Å: Chain N: D.80 Ligands: CL.179 Ligand excluded by PLIP CD.172: 8 residues within 4Å: Chain N: D.127, S.131 Chain S: D.127, S.131 Chain X: D.127, S.131 Ligands: CD.237, CD.302 Ligand excluded by PLIP CD.173: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.174, CD.238, CD.239, CD.303, CD.304 Ligand excluded by PLIP CD.174: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.173, CD.238, CD.239, CD.303, CD.304 Ligand excluded by PLIP CD.175: 1 residues within 4Å: Chain N: H.132 Ligand excluded by PLIP CD.176: 2 residues within 4Å: Chain N: E.60, E.63 Ligand excluded by PLIP CD.183: 3 residues within 4Å: Chain O: D.38, C.48 Ligands: EDO.194 Ligand excluded by PLIP CD.184: 2 residues within 4Å: Chain O: D.80 Ligands: CL.192 Ligand excluded by PLIP CD.185: 8 residues within 4Å: Chain O: D.127, S.131 Chain T: D.127, S.131 Chain V: D.127, S.131 Ligands: CD.250, CD.276 Ligand excluded by PLIP CD.186: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.187, CD.251, CD.252, CD.277, CD.278 Ligand excluded by PLIP CD.187: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.186, CD.251, CD.252, CD.277, CD.278 Ligand excluded by PLIP CD.188: 1 residues within 4Å: Chain O: H.132 Ligand excluded by PLIP CD.189: 2 residues within 4Å: Chain O: E.60, E.63 Ligand excluded by PLIP CD.196: 3 residues within 4Å: Chain P: D.38, C.48 Ligands: EDO.207 Ligand excluded by PLIP CD.197: 2 residues within 4Å: Chain P: D.80 Ligands: CL.205 Ligand excluded by PLIP CD.198: 8 residues within 4Å: Chain P: D.127, S.131 Chain R: D.127, S.131 Chain W: D.127, S.131 Ligands: CD.224, CD.289 Ligand excluded by PLIP CD.199: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.200, CD.225, CD.226, CD.290, CD.291 Ligand excluded by PLIP CD.200: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.199, CD.225, CD.226, CD.290, CD.291 Ligand excluded by PLIP CD.201: 1 residues within 4Å: Chain P: H.132 Ligand excluded by PLIP CD.202: 2 residues within 4Å: Chain P: E.60, E.63 Ligand excluded by PLIP CD.209: 3 residues within 4Å: Chain Q: D.38, C.48 Ligands: EDO.220 Ligand excluded by PLIP CD.210: 2 residues within 4Å: Chain Q: D.80 Ligands: CL.218 Ligand excluded by PLIP CD.211: 8 residues within 4Å: Chain M: D.127, S.131 Chain Q: D.127, S.131 Chain U: D.127, S.131 Ligands: CD.159, CD.263 Ligand excluded by PLIP CD.212: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.160, CD.161, CD.213, CD.264, CD.265 Ligand excluded by PLIP CD.213: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.160, CD.161, CD.212, CD.264, CD.265 Ligand excluded by PLIP CD.214: 1 residues within 4Å: Chain Q: H.132 Ligand excluded by PLIP CD.215: 2 residues within 4Å: Chain Q: E.60, E.63 Ligand excluded by PLIP CD.222: 3 residues within 4Å: Chain R: D.38, C.48 Ligands: EDO.233 Ligand excluded by PLIP CD.223: 2 residues within 4Å: Chain R: D.80 Ligands: CL.231 Ligand excluded by PLIP CD.224: 8 residues within 4Å: Chain P: D.127, S.131 Chain R: D.127, S.131 Chain W: D.127, S.131 Ligands: CD.198, CD.289 Ligand excluded by PLIP CD.225: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.199, CD.200, CD.226, CD.290, CD.291 Ligand excluded by PLIP CD.226: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.199, CD.200, CD.225, CD.290, CD.291 Ligand excluded by PLIP CD.227: 1 residues within 4Å: Chain R: H.132 Ligand excluded by PLIP CD.228: 2 residues within 4Å: Chain R: E.60, E.63 Ligand excluded by PLIP CD.235: 3 residues within 4Å: Chain S: D.38, C.48 Ligands: EDO.246 Ligand excluded by PLIP CD.236: 2 residues within 4Å: Chain S: D.80 Ligands: CL.244 Ligand excluded by PLIP CD.237: 8 residues within 4Å: Chain N: D.127, S.131 Chain S: D.127, S.131 Chain X: D.127, S.131 Ligands: CD.172, CD.302 Ligand excluded by PLIP CD.238: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.173, CD.174, CD.239, CD.303, CD.304 Ligand excluded by PLIP CD.239: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.173, CD.174, CD.238, CD.303, CD.304 Ligand excluded by PLIP CD.240: 1 residues within 4Å: Chain S: H.132 Ligand excluded by PLIP CD.241: 2 residues within 4Å: Chain S: E.60, E.63 Ligand excluded by PLIP CD.248: 3 residues within 4Å: Chain T: D.38, C.48 Ligands: EDO.259 Ligand excluded by PLIP CD.249: 2 residues within 4Å: Chain T: D.80 Ligands: CL.257 Ligand excluded by PLIP CD.250: 8 residues within 4Å: Chain O: D.127, S.131 Chain T: D.127, S.131 Chain V: D.127, S.131 Ligands: CD.185, CD.276 Ligand excluded by PLIP CD.251: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.186, CD.187, CD.252, CD.277, CD.278 Ligand excluded by PLIP CD.252: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.186, CD.187, CD.251, CD.277, CD.278 Ligand excluded by PLIP CD.253: 1 residues within 4Å: Chain T: H.132 Ligand excluded by PLIP CD.254: 2 residues within 4Å: Chain T: E.60, E.63 Ligand excluded by PLIP CD.261: 3 residues within 4Å: Chain U: D.38, C.48 Ligands: EDO.272 Ligand excluded by PLIP CD.262: 2 residues within 4Å: Chain U: D.80 Ligands: CL.270 Ligand excluded by PLIP CD.263: 8 residues within 4Å: Chain M: D.127, S.131 Chain Q: D.127, S.131 Chain U: D.127, S.131 Ligands: CD.159, CD.211 Ligand excluded by PLIP CD.264: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.160, CD.161, CD.212, CD.213, CD.265 Ligand excluded by PLIP CD.265: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.160, CD.161, CD.212, CD.213, CD.264 Ligand excluded by PLIP CD.266: 1 residues within 4Å: Chain U: H.132 Ligand excluded by PLIP CD.267: 2 residues within 4Å: Chain U: E.60, E.63 Ligand excluded by PLIP CD.274: 3 residues within 4Å: Chain V: D.38, C.48 Ligands: EDO.285 Ligand excluded by PLIP CD.275: 2 residues within 4Å: Chain V: D.80 Ligands: CL.283 Ligand excluded by PLIP CD.276: 8 residues within 4Å: Chain O: D.127, S.131 Chain T: D.127, S.131 Chain V: D.127, S.131 Ligands: CD.185, CD.250 Ligand excluded by PLIP CD.277: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.186, CD.187, CD.251, CD.252, CD.278 Ligand excluded by PLIP CD.278: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.186, CD.187, CD.251, CD.252, CD.277 Ligand excluded by PLIP CD.279: 1 residues within 4Å: Chain V: H.132 Ligand excluded by PLIP CD.280: 2 residues within 4Å: Chain V: E.60, E.63 Ligand excluded by PLIP CD.287: 3 residues within 4Å: Chain W: D.38, C.48 Ligands: EDO.298 Ligand excluded by PLIP CD.288: 2 residues within 4Å: Chain W: D.80 Ligands: CL.296 Ligand excluded by PLIP CD.289: 8 residues within 4Å: Chain P: D.127, S.131 Chain R: D.127, S.131 Chain W: D.127, S.131 Ligands: CD.198, CD.224 Ligand excluded by PLIP CD.290: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.199, CD.200, CD.225, CD.226, CD.291 Ligand excluded by PLIP CD.291: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.199, CD.200, CD.225, CD.226, CD.290 Ligand excluded by PLIP CD.292: 1 residues within 4Å: Chain W: H.132 Ligand excluded by PLIP CD.293: 2 residues within 4Å: Chain W: E.60, E.63 Ligand excluded by PLIP CD.300: 3 residues within 4Å: Chain X: D.38, C.48 Ligands: EDO.311 Ligand excluded by PLIP CD.301: 2 residues within 4Å: Chain X: D.80 Ligands: CL.309 Ligand excluded by PLIP CD.302: 8 residues within 4Å: Chain N: D.127, S.131 Chain S: D.127, S.131 Chain X: D.127, S.131 Ligands: CD.172, CD.237 Ligand excluded by PLIP CD.303: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.173, CD.174, CD.238, CD.239, CD.304 Ligand excluded by PLIP CD.304: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.173, CD.174, CD.238, CD.239, CD.303 Ligand excluded by PLIP CD.305: 1 residues within 4Å: Chain X: H.132 Ligand excluded by PLIP CD.306: 2 residues within 4Å: Chain X: E.60, E.63 Ligand excluded by PLIP

48 x SO4: SULFATE ION(Non-functional Binders)

SO4.8: 2 residues within 4Å: Chain A: Q.6, N.7 Ligand excluded by PLIP SO4.9: 3 residues within 4Å: Chain A: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain B: Q.6, N.7 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain B: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.34: 2 residues within 4Å: Chain C: Q.6, N.7 Ligand excluded by PLIP SO4.35: 3 residues within 4Å: Chain C: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.47: 2 residues within 4Å: Chain D: Q.6, N.7 Ligand excluded by PLIP SO4.48: 3 residues within 4Å: Chain D: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.60: 2 residues within 4Å: Chain E: Q.6, N.7 Ligand excluded by PLIP SO4.61: 3 residues within 4Å: Chain E: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.73: 2 residues within 4Å: Chain F: Q.6, N.7 Ligand excluded by PLIP SO4.74: 3 residues within 4Å: Chain F: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.86: 2 residues within 4Å: Chain G: Q.6, N.7 Ligand excluded by PLIP SO4.87: 3 residues within 4Å: Chain G: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.99: 2 residues within 4Å: Chain H: Q.6, N.7 Ligand excluded by PLIP SO4.100: 3 residues within 4Å: Chain H: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.112: 2 residues within 4Å: Chain I: Q.6, N.7 Ligand excluded by PLIP SO4.113: 3 residues within 4Å: Chain I: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.125: 2 residues within 4Å: Chain J: Q.6, N.7 Ligand excluded by PLIP SO4.126: 3 residues within 4Å: Chain J: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.138: 2 residues within 4Å: Chain K: Q.6, N.7 Ligand excluded by PLIP SO4.139: 3 residues within 4Å: Chain K: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.151: 2 residues within 4Å: Chain L: Q.6, N.7 Ligand excluded by PLIP SO4.152: 3 residues within 4Å: Chain L: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.164: 2 residues within 4Å: Chain M: Q.6, N.7 Ligand excluded by PLIP SO4.165: 3 residues within 4Å: Chain M: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.177: 2 residues within 4Å: Chain N: Q.6, N.7 Ligand excluded by PLIP SO4.178: 3 residues within 4Å: Chain N: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.190: 2 residues within 4Å: Chain O: Q.6, N.7 Ligand excluded by PLIP SO4.191: 3 residues within 4Å: Chain O: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.203: 2 residues within 4Å: Chain P: Q.6, N.7 Ligand excluded by PLIP SO4.204: 3 residues within 4Å: Chain P: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.216: 2 residues within 4Å: Chain Q: Q.6, N.7 Ligand excluded by PLIP SO4.217: 3 residues within 4Å: Chain Q: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.229: 2 residues within 4Å: Chain R: Q.6, N.7 Ligand excluded by PLIP SO4.230: 3 residues within 4Å: Chain R: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.242: 2 residues within 4Å: Chain S: Q.6, N.7 Ligand excluded by PLIP SO4.243: 3 residues within 4Å: Chain S: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.255: 2 residues within 4Å: Chain T: Q.6, N.7 Ligand excluded by PLIP SO4.256: 3 residues within 4Å: Chain T: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.268: 2 residues within 4Å: Chain U: Q.6, N.7 Ligand excluded by PLIP SO4.269: 3 residues within 4Å: Chain U: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.281: 2 residues within 4Å: Chain V: Q.6, N.7 Ligand excluded by PLIP SO4.282: 3 residues within 4Å: Chain V: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.294: 2 residues within 4Å: Chain W: Q.6, N.7 Ligand excluded by PLIP SO4.295: 3 residues within 4Å: Chain W: Q.86, D.87, E.88 Ligand excluded by PLIP SO4.307: 2 residues within 4Å: Chain X: Q.6, N.7 Ligand excluded by PLIP SO4.308: 3 residues within 4Å: Chain X: Q.86, D.87, E.88 Ligand excluded by PLIP

24 x CL: CHLORIDE ION(Non-functional Binders)

CL.10: 3 residues within 4Å: Chain A: D.80 Chain V: K.83 Ligands: CD.2 Ligand excluded by PLIP CL.23: 3 residues within 4Å: Chain B: D.80 Chain W: K.83 Ligands: CD.15 Ligand excluded by PLIP CL.36: 3 residues within 4Å: Chain C: D.80 Chain X: K.83 Ligands: CD.28 Ligand excluded by PLIP CL.49: 3 residues within 4Å: Chain D: D.80 Chain U: K.83 Ligands: CD.41 Ligand excluded by PLIP CL.62: 3 residues within 4Å: Chain E: D.80 Chain Q: K.83 Ligands: CD.54 Ligand excluded by PLIP CL.75: 3 residues within 4Å: Chain F: D.80 Chain T: K.83 Ligands: CD.67 Ligand excluded by PLIP CL.88: 3 residues within 4Å: Chain G: D.80 Chain S: K.83 Ligands: CD.80 Ligand excluded by PLIP CL.101: 3 residues within 4Å: Chain H: D.80 Chain R: K.83 Ligands: CD.93 Ligand excluded by PLIP CL.114: 3 residues within 4Å: Chain I: D.80 Chain P: K.83 Ligands: CD.106 Ligand excluded by PLIP CL.127: 3 residues within 4Å: Chain J: D.80 Chain M: K.83 Ligands: CD.119 Ligand excluded by PLIP CL.140: 3 residues within 4Å: Chain K: D.80 Chain N: K.83 Ligands: CD.132 Ligand excluded by PLIP CL.153: 3 residues within 4Å: Chain L: D.80 Chain O: K.83 Ligands: CD.145 Ligand excluded by PLIP CL.166: 3 residues within 4Å: Chain J: K.83 Chain M: D.80 Ligands: CD.158 Ligand excluded by PLIP CL.179: 3 residues within 4Å: Chain K: K.83 Chain N: D.80 Ligands: CD.171 Ligand excluded by PLIP CL.192: 3 residues within 4Å: Chain L: K.83 Chain O: D.80 Ligands: CD.184 Ligand excluded by PLIP CL.205: 3 residues within 4Å: Chain I: K.83 Chain P: D.80 Ligands: CD.197 Ligand excluded by PLIP CL.218: 3 residues within 4Å: Chain E: K.83 Chain Q: D.80 Ligands: CD.210 Ligand excluded by PLIP CL.231: 3 residues within 4Å: Chain H: K.83 Chain R: D.80 Ligands: CD.223 Ligand excluded by PLIP CL.244: 3 residues within 4Å: Chain G: K.83 Chain S: D.80 Ligands: CD.236 Ligand excluded by PLIP CL.257: 3 residues within 4Å: Chain F: K.83 Chain T: D.80 Ligands: CD.249 Ligand excluded by PLIP CL.270: 3 residues within 4Å: Chain D: K.83 Chain U: D.80 Ligands: CD.262 Ligand excluded by PLIP CL.283: 3 residues within 4Å: Chain A: K.83 Chain V: D.80 Ligands: CD.275 Ligand excluded by PLIP CL.296: 3 residues within 4Å: Chain B: K.83 Chain W: D.80 Ligands: CD.288 Ligand excluded by PLIP CL.309: 3 residues within 4Å: Chain C: K.83 Chain X: D.80 Ligands: CD.301 Ligand excluded by PLIP

72 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.11: 6 residues within 4Å: Chain A: Y.36, V.42, G.90, T.91, E.163 Chain O: R.153 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain A: D.38, C.48, H.49, R.52 Chain V: K.67 Ligands: CD.1 Ligand excluded by PLIP EDO.13: 5 residues within 4Å: Chain A: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.24: 6 residues within 4Å: Chain B: Y.36, V.42, G.90, T.91, E.163 Chain P: R.153 Ligand excluded by PLIP EDO.25: 6 residues within 4Å: Chain B: D.38, C.48, H.49, R.52 Chain W: K.67 Ligands: CD.14 Ligand excluded by PLIP EDO.26: 5 residues within 4Å: Chain B: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.37: 6 residues within 4Å: Chain C: Y.36, V.42, G.90, T.91, E.163 Chain N: R.153 Ligand excluded by PLIP EDO.38: 6 residues within 4Å: Chain C: D.38, C.48, H.49, R.52 Chain X: K.67 Ligands: CD.27 Ligand excluded by PLIP EDO.39: 5 residues within 4Å: Chain C: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.50: 6 residues within 4Å: Chain D: Y.36, V.42, G.90, T.91, E.163 Chain M: R.153 Ligand excluded by PLIP EDO.51: 6 residues within 4Å: Chain D: D.38, C.48, H.49, R.52 Chain U: K.67 Ligands: CD.40 Ligand excluded by PLIP EDO.52: 5 residues within 4Å: Chain D: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.63: 6 residues within 4Å: Chain E: Y.36, V.42, G.90, T.91, E.163 Chain U: R.153 Ligand excluded by PLIP EDO.64: 6 residues within 4Å: Chain E: D.38, C.48, H.49, R.52 Chain Q: K.67 Ligands: CD.53 Ligand excluded by PLIP EDO.65: 5 residues within 4Å: Chain E: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.76: 6 residues within 4Å: Chain F: Y.36, V.42, G.90, T.91, E.163 Chain V: R.153 Ligand excluded by PLIP EDO.77: 6 residues within 4Å: Chain F: D.38, C.48, H.49, R.52 Chain T: K.67 Ligands: CD.66 Ligand excluded by PLIP EDO.78: 5 residues within 4Å: Chain F: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.89: 6 residues within 4Å: Chain G: Y.36, V.42, G.90, T.91, E.163 Chain X: R.153 Ligand excluded by PLIP EDO.90: 6 residues within 4Å: Chain G: D.38, C.48, H.49, R.52 Chain S: K.67 Ligands: CD.79 Ligand excluded by PLIP EDO.91: 5 residues within 4Å: Chain G: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.102: 6 residues within 4Å: Chain H: Y.36, V.42, G.90, T.91, E.163 Chain W: R.153 Ligand excluded by PLIP EDO.103: 6 residues within 4Å: Chain H: D.38, C.48, H.49, R.52 Chain R: K.67 Ligands: CD.92 Ligand excluded by PLIP EDO.104: 5 residues within 4Å: Chain H: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.115: 6 residues within 4Å: Chain I: Y.36, V.42, G.90, T.91, E.163 Chain R: R.153 Ligand excluded by PLIP EDO.116: 6 residues within 4Å: Chain I: D.38, C.48, H.49, R.52 Chain P: K.67 Ligands: CD.105 Ligand excluded by PLIP EDO.117: 5 residues within 4Å: Chain I: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.128: 6 residues within 4Å: Chain J: Y.36, V.42, G.90, T.91, E.163 Chain Q: R.153 Ligand excluded by PLIP EDO.129: 6 residues within 4Å: Chain J: D.38, C.48, H.49, R.52 Chain M: K.67 Ligands: CD.118 Ligand excluded by PLIP EDO.130: 5 residues within 4Å: Chain J: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.141: 6 residues within 4Å: Chain K: Y.36, V.42, G.90, T.91, E.163 Chain S: R.153 Ligand excluded by PLIP EDO.142: 6 residues within 4Å: Chain K: D.38, C.48, H.49, R.52 Chain N: K.67 Ligands: CD.131 Ligand excluded by PLIP EDO.143: 5 residues within 4Å: Chain K: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.154: 6 residues within 4Å: Chain L: Y.36, V.42, G.90, T.91, E.163 Chain T: R.153 Ligand excluded by PLIP EDO.155: 6 residues within 4Å: Chain L: D.38, C.48, H.49, R.52 Chain O: K.67 Ligands: CD.144 Ligand excluded by PLIP EDO.156: 5 residues within 4Å: Chain L: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.167: 6 residues within 4Å: Chain C: R.153 Chain M: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.168: 6 residues within 4Å: Chain J: K.67 Chain M: D.38, C.48, H.49, R.52 Ligands: CD.157 Ligand excluded by PLIP EDO.169: 5 residues within 4Å: Chain M: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.180: 6 residues within 4Å: Chain D: R.153 Chain N: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.181: 6 residues within 4Å: Chain K: K.67 Chain N: D.38, C.48, H.49, R.52 Ligands: CD.170 Ligand excluded by PLIP EDO.182: 5 residues within 4Å: Chain N: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.193: 6 residues within 4Å: Chain B: R.153 Chain O: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.194: 6 residues within 4Å: Chain L: K.67 Chain O: D.38, C.48, H.49, R.52 Ligands: CD.183 Ligand excluded by PLIP EDO.195: 5 residues within 4Å: Chain O: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.206: 6 residues within 4Å: Chain A: R.153 Chain P: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.207: 6 residues within 4Å: Chain I: K.67 Chain P: D.38, C.48, H.49, R.52 Ligands: CD.196 Ligand excluded by PLIP EDO.208: 5 residues within 4Å: Chain P: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.219: 6 residues within 4Å: Chain I: R.153 Chain Q: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.220: 6 residues within 4Å: Chain E: K.67 Chain Q: D.38, C.48, H.49, R.52 Ligands: CD.209 Ligand excluded by PLIP EDO.221: 5 residues within 4Å: Chain Q: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.232: 6 residues within 4Å: Chain J: R.153 Chain R: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.233: 6 residues within 4Å: Chain H: K.67 Chain R: D.38, C.48, H.49, R.52 Ligands: CD.222 Ligand excluded by PLIP EDO.234: 5 residues within 4Å: Chain R: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.245: 6 residues within 4Å: Chain L: R.153 Chain S: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.246: 6 residues within 4Å: Chain G: K.67 Chain S: D.38, C.48, H.49, R.52 Ligands: CD.235 Ligand excluded by PLIP EDO.247: 5 residues within 4Å: Chain S: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.258: 6 residues within 4Å: Chain K: R.153 Chain T: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.259: 6 residues within 4Å: Chain F: K.67 Chain T: D.38, C.48, H.49, R.52 Ligands: CD.248 Ligand excluded by PLIP EDO.260: 5 residues within 4Å: Chain T: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.271: 6 residues within 4Å: Chain F: R.153 Chain U: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.272: 6 residues within 4Å: Chain D: K.67 Chain U: D.38, C.48, H.49, R.52 Ligands: CD.261 Ligand excluded by PLIP EDO.273: 5 residues within 4Å: Chain U: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.284: 6 residues within 4Å: Chain E: R.153 Chain V: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.285: 6 residues within 4Å: Chain A: K.67 Chain V: D.38, C.48, H.49, R.52 Ligands: CD.274 Ligand excluded by PLIP EDO.286: 5 residues within 4Å: Chain V: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.297: 6 residues within 4Å: Chain G: R.153 Chain W: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.298: 6 residues within 4Å: Chain B: K.67 Chain W: D.38, C.48, H.49, R.52 Ligands: CD.287 Ligand excluded by PLIP EDO.299: 5 residues within 4Å: Chain W: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP EDO.310: 6 residues within 4Å: Chain H: R.153 Chain X: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.311: 6 residues within 4Å: Chain C: K.67 Chain X: D.38, C.48, H.49, R.52 Ligands: CD.300 Ligand excluded by PLIP EDO.312: 5 residues within 4Å: Chain X: F.50, E.53, L.54, E.57, L.140 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hishikawa, Y. et al., Design of Aromatic Interaction Networks in a Protein Cage Modulated by Fluorescent Ligand Binding. Adv Sci (2025)

Release Date

2025-03-05

Peptides

Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Ferritin light chain

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