- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-24-mer
- Ligands
- 144 x CD: CADMIUM ION(Non-covalent)
- 24 x CL: CHLORIDE ION(Non-functional Binders)
CL.7: 3 residues within 4Å:- Chain A: D.80
- Chain V: Q.82
- Ligands: CD.1
Ligand excluded by PLIPCL.21: 3 residues within 4Å:- Chain B: D.80
- Chain W: Q.82
- Ligands: CD.15
Ligand excluded by PLIPCL.35: 3 residues within 4Å:- Chain C: D.80
- Chain X: Q.82
- Ligands: CD.29
Ligand excluded by PLIPCL.49: 3 residues within 4Å:- Chain D: D.80
- Chain U: Q.82
- Ligands: CD.43
Ligand excluded by PLIPCL.63: 3 residues within 4Å:- Chain E: D.80
- Chain Q: Q.82
- Ligands: CD.57
Ligand excluded by PLIPCL.77: 3 residues within 4Å:- Chain F: D.80
- Chain T: Q.82
- Ligands: CD.71
Ligand excluded by PLIPCL.91: 3 residues within 4Å:- Chain G: D.80
- Chain S: Q.82
- Ligands: CD.85
Ligand excluded by PLIPCL.105: 3 residues within 4Å:- Chain H: D.80
- Chain R: Q.82
- Ligands: CD.99
Ligand excluded by PLIPCL.119: 3 residues within 4Å:- Chain I: D.80
- Chain P: Q.82
- Ligands: CD.113
Ligand excluded by PLIPCL.133: 3 residues within 4Å:- Chain J: D.80
- Chain M: Q.82
- Ligands: CD.127
Ligand excluded by PLIPCL.147: 3 residues within 4Å:- Chain K: D.80
- Chain N: Q.82
- Ligands: CD.141
Ligand excluded by PLIPCL.161: 3 residues within 4Å:- Chain L: D.80
- Chain O: Q.82
- Ligands: CD.155
Ligand excluded by PLIPCL.175: 3 residues within 4Å:- Chain J: Q.82
- Chain M: D.80
- Ligands: CD.169
Ligand excluded by PLIPCL.189: 3 residues within 4Å:- Chain K: Q.82
- Chain N: D.80
- Ligands: CD.183
Ligand excluded by PLIPCL.203: 3 residues within 4Å:- Chain L: Q.82
- Chain O: D.80
- Ligands: CD.197
Ligand excluded by PLIPCL.217: 3 residues within 4Å:- Chain I: Q.82
- Chain P: D.80
- Ligands: CD.211
Ligand excluded by PLIPCL.231: 3 residues within 4Å:- Chain E: Q.82
- Chain Q: D.80
- Ligands: CD.225
Ligand excluded by PLIPCL.245: 3 residues within 4Å:- Chain H: Q.82
- Chain R: D.80
- Ligands: CD.239
Ligand excluded by PLIPCL.259: 3 residues within 4Å:- Chain G: Q.82
- Chain S: D.80
- Ligands: CD.253
Ligand excluded by PLIPCL.273: 3 residues within 4Å:- Chain F: Q.82
- Chain T: D.80
- Ligands: CD.267
Ligand excluded by PLIPCL.287: 3 residues within 4Å:- Chain D: Q.82
- Chain U: D.80
- Ligands: CD.281
Ligand excluded by PLIPCL.301: 3 residues within 4Å:- Chain A: Q.82
- Chain V: D.80
- Ligands: CD.295
Ligand excluded by PLIPCL.315: 3 residues within 4Å:- Chain B: Q.82
- Chain W: D.80
- Ligands: CD.309
Ligand excluded by PLIPCL.329: 3 residues within 4Å:- Chain C: Q.82
- Chain X: D.80
- Ligands: CD.323
Ligand excluded by PLIP- 48 x SO4: SULFATE ION(Non-functional Binders)
SO4.8: 2 residues within 4Å:- Chain A: Q.6, N.7
Ligand excluded by PLIPSO4.9: 3 residues within 4Å:- Chain A: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.22: 2 residues within 4Å:- Chain B: Q.6, N.7
Ligand excluded by PLIPSO4.23: 3 residues within 4Å:- Chain B: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.36: 2 residues within 4Å:- Chain C: Q.6, N.7
Ligand excluded by PLIPSO4.37: 3 residues within 4Å:- Chain C: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.50: 2 residues within 4Å:- Chain D: Q.6, N.7
Ligand excluded by PLIPSO4.51: 3 residues within 4Å:- Chain D: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.64: 2 residues within 4Å:- Chain E: Q.6, N.7
Ligand excluded by PLIPSO4.65: 3 residues within 4Å:- Chain E: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.78: 2 residues within 4Å:- Chain F: Q.6, N.7
Ligand excluded by PLIPSO4.79: 3 residues within 4Å:- Chain F: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.92: 2 residues within 4Å:- Chain G: Q.6, N.7
Ligand excluded by PLIPSO4.93: 3 residues within 4Å:- Chain G: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.106: 2 residues within 4Å:- Chain H: Q.6, N.7
Ligand excluded by PLIPSO4.107: 3 residues within 4Å:- Chain H: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.120: 2 residues within 4Å:- Chain I: Q.6, N.7
Ligand excluded by PLIPSO4.121: 3 residues within 4Å:- Chain I: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.134: 2 residues within 4Å:- Chain J: Q.6, N.7
Ligand excluded by PLIPSO4.135: 3 residues within 4Å:- Chain J: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.148: 2 residues within 4Å:- Chain K: Q.6, N.7
Ligand excluded by PLIPSO4.149: 3 residues within 4Å:- Chain K: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.162: 2 residues within 4Å:- Chain L: Q.6, N.7
Ligand excluded by PLIPSO4.163: 3 residues within 4Å:- Chain L: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.176: 2 residues within 4Å:- Chain M: Q.6, N.7
Ligand excluded by PLIPSO4.177: 3 residues within 4Å:- Chain M: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.190: 2 residues within 4Å:- Chain N: Q.6, N.7
Ligand excluded by PLIPSO4.191: 3 residues within 4Å:- Chain N: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.204: 2 residues within 4Å:- Chain O: Q.6, N.7
Ligand excluded by PLIPSO4.205: 3 residues within 4Å:- Chain O: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.218: 2 residues within 4Å:- Chain P: Q.6, N.7
Ligand excluded by PLIPSO4.219: 3 residues within 4Å:- Chain P: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.232: 2 residues within 4Å:- Chain Q: Q.6, N.7
Ligand excluded by PLIPSO4.233: 3 residues within 4Å:- Chain Q: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.246: 2 residues within 4Å:- Chain R: Q.6, N.7
Ligand excluded by PLIPSO4.247: 3 residues within 4Å:- Chain R: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.260: 2 residues within 4Å:- Chain S: Q.6, N.7
Ligand excluded by PLIPSO4.261: 3 residues within 4Å:- Chain S: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.274: 2 residues within 4Å:- Chain T: Q.6, N.7
Ligand excluded by PLIPSO4.275: 3 residues within 4Å:- Chain T: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.288: 2 residues within 4Å:- Chain U: Q.6, N.7
Ligand excluded by PLIPSO4.289: 3 residues within 4Å:- Chain U: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.302: 2 residues within 4Å:- Chain V: Q.6, N.7
Ligand excluded by PLIPSO4.303: 3 residues within 4Å:- Chain V: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.316: 2 residues within 4Å:- Chain W: Q.6, N.7
Ligand excluded by PLIPSO4.317: 3 residues within 4Å:- Chain W: Q.86, D.87, E.88
Ligand excluded by PLIPSO4.330: 2 residues within 4Å:- Chain X: Q.6, N.7
Ligand excluded by PLIPSO4.331: 3 residues within 4Å:- Chain X: Q.86, D.87, E.88
Ligand excluded by PLIP- 96 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.10: 6 residues within 4Å:- Chain A: Y.36, V.42, G.90, T.91, E.163
- Chain O: R.153
Ligand excluded by PLIPEDO.11: 5 residues within 4Å:- Chain A: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.12: 6 residues within 4Å:- Chain A: F.35, D.38, C.48, H.49, R.52
- Chain V: K.67
Ligand excluded by PLIPEDO.13: 6 residues within 4Å:- Chain A: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.24: 6 residues within 4Å:- Chain B: Y.36, V.42, G.90, T.91, E.163
- Chain P: R.153
Ligand excluded by PLIPEDO.25: 5 residues within 4Å:- Chain B: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.26: 6 residues within 4Å:- Chain B: F.35, D.38, C.48, H.49, R.52
- Chain W: K.67
Ligand excluded by PLIPEDO.27: 6 residues within 4Å:- Chain B: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.38: 6 residues within 4Å:- Chain C: Y.36, V.42, G.90, T.91, E.163
- Chain N: R.153
Ligand excluded by PLIPEDO.39: 5 residues within 4Å:- Chain C: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.40: 6 residues within 4Å:- Chain C: F.35, D.38, C.48, H.49, R.52
- Chain X: K.67
Ligand excluded by PLIPEDO.41: 6 residues within 4Å:- Chain C: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.52: 6 residues within 4Å:- Chain D: Y.36, V.42, G.90, T.91, E.163
- Chain M: R.153
Ligand excluded by PLIPEDO.53: 5 residues within 4Å:- Chain D: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.54: 6 residues within 4Å:- Chain D: F.35, D.38, C.48, H.49, R.52
- Chain U: K.67
Ligand excluded by PLIPEDO.55: 6 residues within 4Å:- Chain D: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.66: 6 residues within 4Å:- Chain E: Y.36, V.42, G.90, T.91, E.163
- Chain U: R.153
Ligand excluded by PLIPEDO.67: 5 residues within 4Å:- Chain E: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.68: 6 residues within 4Å:- Chain E: F.35, D.38, C.48, H.49, R.52
- Chain Q: K.67
Ligand excluded by PLIPEDO.69: 6 residues within 4Å:- Chain E: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.80: 6 residues within 4Å:- Chain F: Y.36, V.42, G.90, T.91, E.163
- Chain V: R.153
Ligand excluded by PLIPEDO.81: 5 residues within 4Å:- Chain F: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.82: 6 residues within 4Å:- Chain F: F.35, D.38, C.48, H.49, R.52
- Chain T: K.67
Ligand excluded by PLIPEDO.83: 6 residues within 4Å:- Chain F: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.94: 6 residues within 4Å:- Chain G: Y.36, V.42, G.90, T.91, E.163
- Chain X: R.153
Ligand excluded by PLIPEDO.95: 5 residues within 4Å:- Chain G: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.96: 6 residues within 4Å:- Chain G: F.35, D.38, C.48, H.49, R.52
- Chain S: K.67
Ligand excluded by PLIPEDO.97: 6 residues within 4Å:- Chain G: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.108: 6 residues within 4Å:- Chain H: Y.36, V.42, G.90, T.91, E.163
- Chain W: R.153
Ligand excluded by PLIPEDO.109: 5 residues within 4Å:- Chain H: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.110: 6 residues within 4Å:- Chain H: F.35, D.38, C.48, H.49, R.52
- Chain R: K.67
Ligand excluded by PLIPEDO.111: 6 residues within 4Å:- Chain H: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.122: 6 residues within 4Å:- Chain I: Y.36, V.42, G.90, T.91, E.163
- Chain R: R.153
Ligand excluded by PLIPEDO.123: 5 residues within 4Å:- Chain I: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.124: 6 residues within 4Å:- Chain I: F.35, D.38, C.48, H.49, R.52
- Chain P: K.67
Ligand excluded by PLIPEDO.125: 6 residues within 4Å:- Chain I: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.136: 6 residues within 4Å:- Chain J: Y.36, V.42, G.90, T.91, E.163
- Chain Q: R.153
Ligand excluded by PLIPEDO.137: 5 residues within 4Å:- Chain J: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.138: 6 residues within 4Å:- Chain J: F.35, D.38, C.48, H.49, R.52
- Chain M: K.67
Ligand excluded by PLIPEDO.139: 6 residues within 4Å:- Chain J: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.150: 6 residues within 4Å:- Chain K: Y.36, V.42, G.90, T.91, E.163
- Chain S: R.153
Ligand excluded by PLIPEDO.151: 5 residues within 4Å:- Chain K: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.152: 6 residues within 4Å:- Chain K: F.35, D.38, C.48, H.49, R.52
- Chain N: K.67
Ligand excluded by PLIPEDO.153: 6 residues within 4Å:- Chain K: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.164: 6 residues within 4Å:- Chain L: Y.36, V.42, G.90, T.91, E.163
- Chain T: R.153
Ligand excluded by PLIPEDO.165: 5 residues within 4Å:- Chain L: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.166: 6 residues within 4Å:- Chain L: F.35, D.38, C.48, H.49, R.52
- Chain O: K.67
Ligand excluded by PLIPEDO.167: 6 residues within 4Å:- Chain L: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.178: 6 residues within 4Å:- Chain C: R.153
- Chain M: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.179: 5 residues within 4Å:- Chain M: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.180: 6 residues within 4Å:- Chain J: K.67
- Chain M: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.181: 6 residues within 4Å:- Chain M: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.192: 6 residues within 4Å:- Chain D: R.153
- Chain N: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.193: 5 residues within 4Å:- Chain N: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.194: 6 residues within 4Å:- Chain K: K.67
- Chain N: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.195: 6 residues within 4Å:- Chain N: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.206: 6 residues within 4Å:- Chain B: R.153
- Chain O: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.207: 5 residues within 4Å:- Chain O: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.208: 6 residues within 4Å:- Chain L: K.67
- Chain O: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.209: 6 residues within 4Å:- Chain O: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.220: 6 residues within 4Å:- Chain A: R.153
- Chain P: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.221: 5 residues within 4Å:- Chain P: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.222: 6 residues within 4Å:- Chain I: K.67
- Chain P: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.223: 6 residues within 4Å:- Chain P: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.234: 6 residues within 4Å:- Chain I: R.153
- Chain Q: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.235: 5 residues within 4Å:- Chain Q: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.236: 6 residues within 4Å:- Chain E: K.67
- Chain Q: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.237: 6 residues within 4Å:- Chain Q: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.248: 6 residues within 4Å:- Chain J: R.153
- Chain R: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.249: 5 residues within 4Å:- Chain R: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.250: 6 residues within 4Å:- Chain H: K.67
- Chain R: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.251: 6 residues within 4Å:- Chain R: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.262: 6 residues within 4Å:- Chain L: R.153
- Chain S: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.263: 5 residues within 4Å:- Chain S: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.264: 6 residues within 4Å:- Chain G: K.67
- Chain S: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.265: 6 residues within 4Å:- Chain S: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.276: 6 residues within 4Å:- Chain K: R.153
- Chain T: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.277: 5 residues within 4Å:- Chain T: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.278: 6 residues within 4Å:- Chain F: K.67
- Chain T: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.279: 6 residues within 4Å:- Chain T: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.290: 6 residues within 4Å:- Chain F: R.153
- Chain U: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.291: 5 residues within 4Å:- Chain U: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.292: 6 residues within 4Å:- Chain D: K.67
- Chain U: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.293: 6 residues within 4Å:- Chain U: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.304: 6 residues within 4Å:- Chain E: R.153
- Chain V: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.305: 5 residues within 4Å:- Chain V: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.306: 6 residues within 4Å:- Chain A: K.67
- Chain V: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.307: 6 residues within 4Å:- Chain V: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.318: 6 residues within 4Å:- Chain G: R.153
- Chain W: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.319: 5 residues within 4Å:- Chain W: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.320: 6 residues within 4Å:- Chain B: K.67
- Chain W: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.321: 6 residues within 4Å:- Chain W: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIPEDO.332: 6 residues within 4Å:- Chain H: R.153
- Chain X: Y.36, V.42, G.90, T.91, E.163
Ligand excluded by PLIPEDO.333: 5 residues within 4Å:- Chain X: F.50, E.53, L.54, E.57, L.140
Ligand excluded by PLIPEDO.334: 6 residues within 4Å:- Chain C: K.67
- Chain X: F.35, D.38, C.48, H.49, R.52
Ligand excluded by PLIPEDO.335: 6 residues within 4Å:- Chain X: T.91, T.92, L.93, I.151, A.159, E.163
Ligand excluded by PLIP- 24 x 01: Nile Red
01.14: 10 residues within 4Å:- Chain A: L.24, S.27, Y.28, E.56, F.59
- Chain V: S.27, Y.28, E.56, F.59
- Ligands: 01.308
12 PLIP interactions:7 interactions with chain V, 5 interactions with chain A- Hydrophobic interactions: V:Y.28, V:E.56, V:E.56, V:F.59, A:Y.28, A:E.56, A:F.59
- Hydrogen bonds: V:S.27
- Water bridges: V:E.56
- pi-Stacking: V:F.59, A:F.59, A:F.59
01.28: 10 residues within 4Å:- Chain B: L.24, S.27, Y.28, E.56, F.59
- Chain W: S.27, Y.28, E.56, F.59
- Ligands: 01.322
12 PLIP interactions:7 interactions with chain W, 5 interactions with chain B- Hydrophobic interactions: W:Y.28, W:E.56, W:E.56, W:F.59, B:Y.28, B:E.56, B:F.59
- Hydrogen bonds: W:S.27
- Water bridges: W:E.56
- pi-Stacking: W:F.59, B:F.59, B:F.59
01.42: 10 residues within 4Å:- Chain C: L.24, S.27, Y.28, E.56, F.59
- Chain X: S.27, Y.28, E.56, F.59
- Ligands: 01.336
12 PLIP interactions:6 interactions with chain C, 6 interactions with chain X- Hydrophobic interactions: C:Y.28, C:E.56, C:F.59, X:Y.28, X:E.56, X:E.56, X:F.59
- Water bridges: C:E.63
- pi-Stacking: C:F.59, C:F.59, X:F.59
- Hydrogen bonds: X:S.27
01.56: 10 residues within 4Å:- Chain D: L.24, S.27, Y.28, E.56, F.59
- Chain U: S.27, Y.28, E.56, F.59
- Ligands: 01.294
12 PLIP interactions:6 interactions with chain D, 6 interactions with chain U- Hydrophobic interactions: D:Y.28, D:E.56, D:F.59, U:Y.28, U:E.56, U:E.56, U:F.59
- Water bridges: D:E.63
- pi-Stacking: D:F.59, D:F.59, U:F.59
- Hydrogen bonds: U:S.27
01.70: 10 residues within 4Å:- Chain E: L.24, S.27, Y.28, E.56, F.59
- Chain Q: S.27, Y.28, E.56, F.59
- Ligands: 01.238
12 PLIP interactions:7 interactions with chain Q, 5 interactions with chain E- Hydrophobic interactions: Q:Y.28, Q:E.56, Q:E.56, Q:F.59, E:Y.28, E:E.56, E:F.59
- Hydrogen bonds: Q:S.27
- Water bridges: Q:E.56
- pi-Stacking: Q:F.59, E:F.59, E:F.59
01.84: 10 residues within 4Å:- Chain F: L.24, S.27, Y.28, E.56, F.59
- Chain T: S.27, Y.28, E.56, F.59
- Ligands: 01.280
12 PLIP interactions:6 interactions with chain T, 6 interactions with chain F- Hydrophobic interactions: T:Y.28, T:E.56, T:E.56, T:F.59, F:Y.28, F:E.56, F:F.59
- Hydrogen bonds: T:S.27
- pi-Stacking: T:F.59, F:F.59, F:F.59
- Water bridges: F:E.63
01.98: 10 residues within 4Å:- Chain G: L.24, S.27, Y.28, E.56, F.59
- Chain S: S.27, Y.28, E.56, F.59
- Ligands: 01.266
12 PLIP interactions:5 interactions with chain G, 7 interactions with chain S- Hydrophobic interactions: G:Y.28, G:E.56, G:F.59, S:Y.28, S:E.56, S:E.56, S:F.59
- pi-Stacking: G:F.59, G:F.59, S:F.59
- Hydrogen bonds: S:S.27
- Water bridges: S:E.56
01.112: 10 residues within 4Å:- Chain H: L.24, S.27, Y.28, E.56, F.59
- Chain R: S.27, Y.28, E.56, F.59
- Ligands: 01.252
12 PLIP interactions:6 interactions with chain H, 6 interactions with chain R- Hydrophobic interactions: H:Y.28, H:E.56, H:F.59, R:Y.28, R:E.56, R:E.56, R:F.59
- Water bridges: H:E.63
- pi-Stacking: H:F.59, H:F.59, R:F.59
- Hydrogen bonds: R:S.27
01.126: 10 residues within 4Å:- Chain I: L.24, S.27, Y.28, E.56, F.59
- Chain P: S.27, Y.28, E.56, F.59
- Ligands: 01.224
12 PLIP interactions:6 interactions with chain P, 6 interactions with chain I- Hydrophobic interactions: P:Y.28, P:E.56, P:E.56, P:F.59, I:Y.28, I:E.56, I:F.59
- Hydrogen bonds: P:S.27
- pi-Stacking: P:F.59, I:F.59, I:F.59
- Water bridges: I:E.63
01.140: 10 residues within 4Å:- Chain J: L.24, S.27, Y.28, E.56, F.59
- Chain M: S.27, Y.28, E.56, F.59
- Ligands: 01.182
12 PLIP interactions:5 interactions with chain J, 7 interactions with chain M- Hydrophobic interactions: J:Y.28, J:E.56, J:F.59, M:Y.28, M:E.56, M:E.56, M:F.59
- pi-Stacking: J:F.59, J:F.59, M:F.59
- Hydrogen bonds: M:S.27
- Water bridges: M:E.56
01.154: 10 residues within 4Å:- Chain K: L.24, S.27, Y.28, E.56, F.59
- Chain N: S.27, Y.28, E.56, F.59
- Ligands: 01.196
12 PLIP interactions:7 interactions with chain N, 5 interactions with chain K- Hydrophobic interactions: N:Y.28, N:E.56, N:E.56, N:F.59, K:Y.28, K:E.56, K:F.59
- Hydrogen bonds: N:S.27
- Water bridges: N:E.56
- pi-Stacking: N:F.59, K:F.59, K:F.59
01.168: 10 residues within 4Å:- Chain L: L.24, S.27, Y.28, E.56, F.59
- Chain O: S.27, Y.28, E.56, F.59
- Ligands: 01.210
12 PLIP interactions:6 interactions with chain O, 6 interactions with chain L- Hydrophobic interactions: O:Y.28, O:E.56, O:E.56, O:F.59, L:Y.28, L:E.56, L:F.59
- Hydrogen bonds: O:S.27
- pi-Stacking: O:F.59, L:F.59, L:F.59
- Water bridges: L:E.63
01.182: 10 residues within 4Å:- Chain J: S.27, Y.28, E.56, F.59
- Chain M: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.140
12 PLIP interactions:6 interactions with chain M, 6 interactions with chain J- Hydrophobic interactions: M:Y.28, M:E.56, M:F.59, J:Y.28, J:E.56, J:E.56, J:F.59
- Water bridges: M:E.63
- pi-Stacking: M:F.59, M:F.59, J:F.59
- Hydrogen bonds: J:S.27
01.196: 10 residues within 4Å:- Chain K: S.27, Y.28, E.56, F.59
- Chain N: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.154
12 PLIP interactions:6 interactions with chain N, 6 interactions with chain K- Hydrophobic interactions: N:Y.28, N:E.56, N:F.59, K:Y.28, K:E.56, K:E.56, K:F.59
- Water bridges: N:E.63
- pi-Stacking: N:F.59, N:F.59, K:F.59
- Hydrogen bonds: K:S.27
01.210: 10 residues within 4Å:- Chain L: S.27, Y.28, E.56, F.59
- Chain O: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.168
12 PLIP interactions:5 interactions with chain O, 7 interactions with chain L- Hydrophobic interactions: O:Y.28, O:E.56, O:F.59, L:Y.28, L:E.56, L:E.56, L:F.59
- pi-Stacking: O:F.59, O:F.59, L:F.59
- Hydrogen bonds: L:S.27
- Water bridges: L:E.56
01.224: 10 residues within 4Å:- Chain I: S.27, Y.28, E.56, F.59
- Chain P: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.126
12 PLIP interactions:5 interactions with chain P, 7 interactions with chain I- Hydrophobic interactions: P:Y.28, P:E.56, P:F.59, I:Y.28, I:E.56, I:E.56, I:F.59
- pi-Stacking: P:F.59, P:F.59, I:F.59
- Hydrogen bonds: I:S.27
- Water bridges: I:E.56
01.238: 10 residues within 4Å:- Chain E: S.27, Y.28, E.56, F.59
- Chain Q: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.70
12 PLIP interactions:6 interactions with chain E, 6 interactions with chain Q- Hydrophobic interactions: E:Y.28, E:E.56, E:E.56, E:F.59, Q:Y.28, Q:E.56, Q:F.59
- Hydrogen bonds: E:S.27
- pi-Stacking: E:F.59, Q:F.59, Q:F.59
- Water bridges: Q:E.63
01.252: 10 residues within 4Å:- Chain H: S.27, Y.28, E.56, F.59
- Chain R: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.112
12 PLIP interactions:5 interactions with chain R, 7 interactions with chain H- Hydrophobic interactions: R:Y.28, R:E.56, R:F.59, H:Y.28, H:E.56, H:E.56, H:F.59
- pi-Stacking: R:F.59, R:F.59, H:F.59
- Hydrogen bonds: H:S.27
- Water bridges: H:E.56
01.266: 10 residues within 4Å:- Chain G: S.27, Y.28, E.56, F.59
- Chain S: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.98
12 PLIP interactions:6 interactions with chain S, 6 interactions with chain G- Hydrophobic interactions: S:Y.28, S:E.56, S:F.59, G:Y.28, G:E.56, G:E.56, G:F.59
- Water bridges: S:E.63
- pi-Stacking: S:F.59, S:F.59, G:F.59
- Hydrogen bonds: G:S.27
01.280: 10 residues within 4Å:- Chain F: S.27, Y.28, E.56, F.59
- Chain T: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.84
12 PLIP interactions:5 interactions with chain T, 7 interactions with chain F- Hydrophobic interactions: T:Y.28, T:E.56, T:F.59, F:Y.28, F:E.56, F:E.56, F:F.59
- pi-Stacking: T:F.59, T:F.59, F:F.59
- Hydrogen bonds: F:S.27
- Water bridges: F:E.56
01.294: 10 residues within 4Å:- Chain D: S.27, Y.28, E.56, F.59
- Chain U: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.56
12 PLIP interactions:5 interactions with chain U, 7 interactions with chain D- Hydrophobic interactions: U:Y.28, U:E.56, U:F.59, D:Y.28, D:E.56, D:E.56, D:F.59
- pi-Stacking: U:F.59, U:F.59, D:F.59
- Hydrogen bonds: D:S.27
- Water bridges: D:E.56
01.308: 10 residues within 4Å:- Chain A: S.27, Y.28, E.56, F.59
- Chain V: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.14
12 PLIP interactions:6 interactions with chain A, 6 interactions with chain V- Hydrophobic interactions: A:Y.28, A:E.56, A:E.56, A:F.59, V:Y.28, V:E.56, V:F.59
- Hydrogen bonds: A:S.27
- pi-Stacking: A:F.59, V:F.59, V:F.59
- Water bridges: V:E.63
01.322: 10 residues within 4Å:- Chain B: S.27, Y.28, E.56, F.59
- Chain W: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.28
12 PLIP interactions:6 interactions with chain W, 6 interactions with chain B- Hydrophobic interactions: W:Y.28, W:E.56, W:F.59, B:Y.28, B:E.56, B:E.56, B:F.59
- Water bridges: W:E.63
- pi-Stacking: W:F.59, W:F.59, B:F.59
- Hydrogen bonds: B:S.27
01.336: 10 residues within 4Å:- Chain C: S.27, Y.28, E.56, F.59
- Chain X: L.24, S.27, Y.28, E.56, F.59
- Ligands: 01.42
12 PLIP interactions:7 interactions with chain C, 5 interactions with chain X- Hydrophobic interactions: C:Y.28, C:E.56, C:E.56, C:F.59, X:Y.28, X:E.56, X:F.59
- Hydrogen bonds: C:S.27
- Water bridges: C:E.56
- pi-Stacking: C:F.59, X:F.59, X:F.59
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hishikawa, Y. et al., Design of Aromatic Interaction Networks in a Protein Cage Modulated by Fluorescent Ligand Binding. Adv Sci (2025)
- Release Date
- 2025-03-05
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-24-mer
- Ligands
- 144 x CD: CADMIUM ION(Non-covalent)
- 24 x CL: CHLORIDE ION(Non-functional Binders)
- 48 x SO4: SULFATE ION(Non-functional Binders)
- 96 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 24 x 01: Nile Red
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hishikawa, Y. et al., Design of Aromatic Interaction Networks in a Protein Cage Modulated by Fluorescent Ligand Binding. Adv Sci (2025)
- Release Date
- 2025-03-05
- Peptides
- Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A