SMTL ID : 9kqa.1

Cryo-EM structure of human VMAT2 in complex with Tetrabenazine

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x EBZ: (3S,5R,11bS)-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one(Non-covalent)

EBZ.1: 13 residues within 4Å: Chain A: L.133, T.134, F.231, K.234, R.285, I.404, E.408, F.430, A.433, S.434, Y.437, I.491, Y.529 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.133, A:T.134, A:F.231, A:I.404, A:F.430, A:A.433, A:Y.437, A:I.491, A:Y.529 Hydrogen bonds: A:N.130, A:R.285, A:Y.529 Salt bridges: A:E.408

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, F. et al., Drug inhibition and substrate transport mechanisms of human VMAT2. Nat Commun (2025)

Release Date

2025-01-15

Peptides

Soluble cytochrome b562,Synaptic vesicular amine transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Soluble cytochrome b562,Synaptic vesicular amine transporter

Related Entries With Identical Sequence