SMTL ID : 9l7e.1

Crystal structure of human kinesin-1 motor domain (G234A mutant) in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.92 Ligands: ADP.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.92, H2O.1, H2O.1, H2O.1

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 12 residues within 4Å: Chain A: R.14, R.16, P.17, Q.86, T.87, S.88, S.89, G.90, K.91, T.92, H.93 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:R.14, A:S.88, A:S.89, A:G.90, A:K.91, A:T.92, A:H.93 Water bridges: A:T.87, A:K.91, A:T.92, A:T.92, A:T.92, A:H.93 Salt bridges: A:K.91 pi-Stacking: A:H.93, A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Makino, T. et al., Tension-induced suppression of allosteric conformational changes coordinates kinesin-1 stepping. Biorxiv (2024)

Release Date

2025-04-23

Peptides

Kinesin-1 heavy chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kinesin-1 heavy chain