SMTL ID : 9lb7.1

Crystal structure of trehalose-6-phosphate phosphorylase from Weissella ceti in complex with beta-Glc1P

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x XGP: 1-O-phosphono-beta-D-glucopyranose(Non-covalent)

XGP.1: 11 residues within 4Å: Chain A: S.325, Y.333, F.338, W.339, D.340, W.386, E.477, K.597, Q.598, G.643, S.644 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.325, A:S.325, A:Y.333, A:W.339, A:K.597, A:K.597, A:Q.598, A:Q.598 Water bridges: A:Q.416, A:R.578, A:H.689 Salt bridges: A:K.597, A:K.597

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: E.217, G.218 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.217, A:G.218, H2O.11, H2O.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Feng, Y. et al., Structural Insights into Trehalose-6-Phosphate Phosphorylase and Its Role in Trehalose 6-Phosphate Biosynthesis via a Multienzyme Cascade. J.Agric.Food Chem. (2025)

Release Date

2025-07-30

Peptides

Trehalose-6-phosphate hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Trehalose-6-phosphate hydrolase

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