SMTL ID : 9lio.1 (1 other biounit)

Human cGAS catalytic domain bound with XL-3123

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

monomer

Ligands

1 x 01: 2-[bis[1-[4,6-bis(fluoranyl)-1,3-benzothiazol-2-yl]-3-methyl-5-oxidanyl-pyrazol-4-yl]methyl]benzoic acid

01.1: 21 residues within 4Å: Chain A: V.62, K.63, D.71, A.91, S.149, P.150, T.165, K.206, R.220, L.221, S.222, F.223, S.224, E.262, K.265, S.278, S.279, Y.280, N.326, I.329, F.332 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.62, A:P.150, A:E.262, A:K.265, A:Y.280, A:I.329 Hydrogen bonds: A:R.220, A:R.220, A:S.279, A:Y.280 Water bridges: A:S.224 Salt bridges: A:K.206, A:R.220 pi-Stacking: A:Y.280 pi-Cation interactions: A:R.220, A:K.265

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.234, C.240, C.241, C.248 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.234, A:C.240, A:C.241, A:C.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, W.F. et al., Discovery of novel cGAS inhibitors. To Be Published

Release Date

2025-06-04

Peptides

Cyclic GMP-AMP synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclic GMP-AMP synthase

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