SMTL ID : 9lyp.1

Alpha SARS-CoV-2 spike protein RBD-down in complex with REGN10987 Fab homologue (local refinement)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: F.5, G.6, F.9, N.10 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kocharovskaya, M.V. et al., Structure and dynamics of Alpha B.1.1.7 SARS-CoV-2 S-protein in complex with Fab of neutralizing antibody REGN10987. Biochem.Biophys.Res.Commun. (2025)

Release Date

2025-04-02

Peptides

Spike glycoprotein: A
REGN10987 Fab homologue (Light chain): B
REGN10987 Fab homologue (Heavy chain): C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
i

C
j

Spike glycoprotein

REGN10987 Fab homologue (Light chain)

REGN10987 Fab homologue (Heavy chain)

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