SMTL ID : 9m3n.1

Crystal structure of human TRIM21 PRYSPRY in complex with T-02

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

monomer

Ligands

1 x 01: 1-ethyl-~{N}-methyl-5-phenyl-~{N}-[3-[3-(trifluoromethyl)phenyl]cyclobutyl]pyrazole-4-carboxamide

01.1: 17 residues within 4Å: Chain A: Y.44, P.45, M.46, A.69, W.70, D.71, F.85, L.86, L.87, W.97, L.98, W.99, E.105, Q.111, S.163, G.165, F.166 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.44, A:L.87, A:W.97, A:W.97 Hydrogen bonds: A:L.87 pi-Stacking: A:F.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, L. et al., TRIM21-Driven Degradation of BRD4: Development of Heterobifunctional Degraders and Investigation of Recruitment and Selectivity Mechanisms. J.Chem.Inf.Model. (2025)

Release Date

2025-07-16

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase TRIM21