SMTL ID : 9miu.1

Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-9-039SRM.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x 01: 6-chloro-N,N-dimethyl-5-(pyridin-4-yl)pyridazin-3-amine

01.1: 10 residues within 4Å: Chain A: L.18, V.26, A.39, I.76, L.92, E.93, L.94, V.95, E.99, I.159 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.39, A:I.76, A:I.159 Hydrogen bonds: A:V.95 Water bridges: A:D.160

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: P.73, E.93, K.157 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.157 SO4.3: 1 residues within 4Å: Chain A: K.85 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.85 SO4.4: 4 residues within 4Å: Chain A: Y.233, E.234, F.235, R.252 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.233 Water bridges: A:F.235 Salt bridges: A:R.252 SO4.5: 4 residues within 4Å: Chain A: R.62, H.165, E.172, K.174 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.172 Salt bridges: A:R.62, A:K.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Minasov, G. et al., Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-9-039SRM. To Be Published

Release Date

2024-12-25

Peptides

Death-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Death-associated protein kinase 1