SMTL ID : 9mx0.1

Cluster of bipartite complex of MmpL5-AcpM from Mycolicibacterium smegmatis

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-12-12-mer

Ligands

8 x PNS: 4'-PHOSPHOPANTETHEINE(Non-covalent)

PNS.1: 6 residues within 4Å: Chain A: S.41, L.42 Chain B: R.383, I.395 Chain D: T.32, F.33 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain D Hydrophobic interactions: A:L.42, D:T.32 PNS.2: 6 residues within 4Å: Chain C: S.41, L.42 Chain D: R.383, A.387 Chain P: T.32, R.365 4 PLIP interactions: 3 interactions with chain P, 1 interactions with chain C Hydrophobic interactions: P:T.32, C:L.42 Hydrogen bonds: P:R.365, P:R.365 PNS.3: 5 residues within 4Å: Chain E: S.41, L.42 Chain F: R.383, A.387 Chain Q: T.32 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain Q Hydrophobic interactions: E:L.42, Q:T.32 PNS.4: 5 residues within 4Å: Chain F: T.32 Chain G: D.40, S.41, L.42 Chain H: R.383 4 PLIP interactions: 1 interactions with chain H, 3 interactions with chain G Hydrogen bonds: H:R.383, G:S.41 Hydrophobic interactions: G:L.42, G:L.42 PNS.5: 10 residues within 4Å: Chain J: T.32, F.33 Chain K: D.40, S.41, L.42 Chain L: R.383, V.384, A.387, I.395, L.926 6 PLIP interactions: 4 interactions with chain K, 1 interactions with chain L, 1 interactions with chain J Hydrophobic interactions: K:L.42, L:A.387, J:T.32 Hydrogen bonds: K:D.40, K:S.41, K:L.42 PNS.6: 5 residues within 4Å: Chain N: D.40, S.41, L.42 Chain Q: R.383, A.387 4 PLIP interactions: 4 interactions with chain N Hydrophobic interactions: N:S.41, N:L.42 Hydrogen bonds: N:D.40, N:S.41 PNS.7: 7 residues within 4Å: Chain B: T.32, R.365 Chain S: S.41, L.42, V.45 Chain V: R.383, A.387 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain S Hydrophobic interactions: B:T.32, S:L.42 Hydrogen bonds: B:R.365, B:R.365 PNS.8: 4 residues within 4Å: Chain T: S.41, L.42 Chain W: R.383, A.387 2 PLIP interactions: 2 interactions with chain T Hydrophobic interactions: T:L.42 Hydrogen bonds: T:L.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Cluster of bipartite complex of MmpL5-AcpM from Mycolicibacterium smegmatis. To Be Published

Release Date

2025-07-30

Peptides

Meromycolate extension acyl carrier protein: ACEGIKMNOSTU
MmpL5 protein: BDFHJLPQRVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
C

E
E

G
G

I
I

K
K

M
M

N
N

O
O

S
S

T
T

U
U

B
A

D
D

F
F

H
H

J
J

L
L

P
P

Q
Q

R
R

V
V

W
W

X
X

Membrane

We predict this structure to be a membrane protein.
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Meromycolate extension acyl carrier protein

MmpL5 protein

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