SMTL ID : 9ne0.1

The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex prepared with forked DNA, ATP-gamma-S and Pritelivir

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 01: Pritelivir

01.1: 18 residues within 4Å: Chain A: Y.340, L.341, F.344, A.883, N.886, A.887, F.891 Chain B: N.63, I.306, N.307, N.308, C.311, H.314, M.320, K.321, E.324, Y.801, Y.847 13 PLIP interactions: 5 interactions with chain A, 8 interactions with chain B Hydrophobic interactions: A:Y.340, A:F.344, A:A.887, A:F.891, B:N.63, B:N.308, B:K.321, B:K.321 Hydrogen bonds: A:N.886, B:N.308, B:H.314, B:K.321 pi-Cation interactions: B:K.321

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yao, Q. et al., Structure and Inhibition Mechanism of Herpesvirus Helicase-Primase. To Be Published

Release Date

2025-08-13

Peptides

DNA primase: A
DNA replication helicase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA primase

DNA replication helicase