SMTL ID : 9nee.1

The flexible portion of Cryo-EM structure of Herpesvirus Helicase-Primase complex with Pritelivir

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x 01: Pritelivir

01.1: 15 residues within 4Å: Chain A: Y.356, L.357, A.899, N.902, A.903 Chain B: N.62, N.306, N.307, C.310, H.313, G.316, M.319, K.320, E.323, Y.846 12 PLIP interactions: 5 interactions with chain A, 7 interactions with chain B Hydrophobic interactions: A:Y.356, A:N.902, B:N.307, B:M.319, B:K.320, B:K.320 Hydrogen bonds: A:A.899, A:N.902, B:N.307, B:K.320 pi-Stacking: A:F.360 pi-Cation interactions: B:K.320

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yao, Q. et al., Structure and Inhibition Mechanism of Herpesvirus Helicase-Primase. To Be Published

Release Date

2025-08-13

Peptides

DNA primase: A
DNA replication helicase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA primase

DNA replication helicase