SMTL ID : 9nm0.1

AZ5104 (metabolite of AZD9291) in complex with WT EGFR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

monomer

Ligands

1 x VO7: N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-5-{[4-(1H-indol-3-yl)pyrimidin-2-yl]amino}-4-methoxyphenyl)propanamide(Covalent)

VO7.1: 11 residues within 4Å: Chain A: L.23, V.31, A.48, Q.96, L.97, M.98, P.99, G.101, C.102, D.105, L.149 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.31, A:A.48, A:L.149 Hydrogen bonds: A:M.98, A:M.98, A:C.102 Salt bridges: A:D.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Damghani, T. et al., Profiling and Optimizing Targeted Covalent Inhibitors through EGFR-Guided Studies. J.Med.Chem. (2025)

Release Date

2025-10-08

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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