SMTL ID : 9o4m.1 (1 other biounit)

Crystal structure of Ubiquitin Carboxy Terminal Hydrolase L1 Q209C mutant covalently crosslinked to ubiquitin genetically encoded with N6-(6-bromohexanoyl)-L-lysine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 6NA: HEXANOIC ACID(Covalent)

6NA.1: 7 residues within 4Å: Chain A: K.9, K.11 Chain B: T.205, E.206, E.208, C.209, G.210 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, C. et al., Internal Ubiquitin Electrophiles for Covalent Trapping and Inhibition of Deubiquitinases. Chembiochem (2025)

Release Date

2025-07-30

Peptides

Polyubiquitin-C: A
Ubiquitin carboxyl-terminal hydrolase isozyme L1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
B

Polyubiquitin-C

Ubiquitin carboxyl-terminal hydrolase isozyme L1

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