SMTL ID : 9ogw.1

Identification of ligands for E3 ligases using fragment-based methods

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 01: 2-{[(thiophen-3-yl)methyl]amino}benzoic acid

01.1: 11 residues within 4Å: Chain A: G.65, P.66, G.67, G.68, P.69, G.70, G.71, S.72, Y.140, H.143, R.163 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.140, A:Y.140, A:H.143 Hydrogen bonds: A:G.65, A:S.72 Water bridges: A:S.72, A:S.72, A:G.73, A:G.73 pi-Stacking: A:H.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Waterson, A.G. et al., Identification of ligands for E3 ligases with restricted expression using fragment-based methods. Rsc Chem Biol (2025)

Release Date

2025-10-22

Peptides

E3 ubiquitin-protein ligase CBL-C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase CBL-C