SMTL ID : 9otw.2 (1 other biounit)

Influenza A Virus Nucleoprotein(8-498)NP complex with 5-(4-{[(2R)-6,6-dimethyl-1,4-dioxan-2-yl]methoxy}phenyl)-2-oxo-6-(trifluoromethyl)-1,2-dihydropyridine-3-carboxamide (compound 13)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

monomer

Ligands

1 x 01: 5-(4-{[(2R)-6,6-dimethyl-1,4-dioxan-2-yl]methoxy}phenyl)-2-oxo-6-(trifluoromethyl)-1,2-dihydropyridine-3-carboxamide

01.1: 18 residues within 4Å: Chain A: S.268, L.292, V.293, G.294, P.297, F.298, W.324, H.328, A.330, E.333, V.337, L.338, I.341, A.381, I.382, R.383, F.452, Q.453 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.298, A:A.381, A:R.383 Hydrogen bonds: A:S.268, A:S.268, A:G.294, A:R.383, A:Q.453 pi-Cation interactions: A:R.383

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: S.135, D.139, G.163, S.164, T.165 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:S.135, A:D.139, A:T.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taft, B.R. et al., Discovery and Optimization of a Novel Series of Influenza A Virus Replication Inhibitors Targeting the Nucleoprotein Protein-Protein Interaction. J.Med.Chem. (2025)

Release Date

2025-08-06

Peptides

Nucleoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nucleoprotein

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