SMTL ID : 9q4d.1

A DARPin fused to the double trigger 1TEL variant crystallization chaperone via a direct helical fusion

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: E.40, N.41, E.42, F.43, S.44 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.42 EDO.2: 5 residues within 4Å: Chain A: N.148, S.150, T.156, D.179, A.182 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.183 EDO.3: 4 residues within 4Å: Chain A: D.179, N.181, A.182, Y.183 No protein-ligand interaction detected (PLIP) EDO.4: 3 residues within 4Å: Chain A: G.210, A.211, D.212 2 PLIP interactions: 2 interactions with chain A Water bridges: A:A.211, A:D.212 EDO.5: 4 residues within 4Å: Chain A: K.91, A.95, E.103, L.107 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.103 Water bridges: A:E.103 EDO.6: 3 residues within 4Å: Chain A: R.69, P.73, H.74 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.73 EDO.7: 6 residues within 4Å: Chain A: I.155, A.160, A.163, T.164, L.193, Y.197 No protein-ligand interaction detected (PLIP)

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 5 residues within 4Å: Chain A: H.85, L.88, G.89, A.112, D.113 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain A: A.215, Q.216 Ligand excluded by PLIP CL.10: 3 residues within 4Å: Chain A: Y.183, T.189, A.215 Ligand excluded by PLIP CL.11: 2 residues within 4Å: Chain A: Q.84, L.87 Ligand excluded by PLIP

1 x K: POTASSIUM ION(Non-covalent)

K.12: 7 residues within 4Å: Chain A: T.117, G.121, T.123, H.126, A.149, S.150, D.151 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.121, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Averret, J.C. et al., Opening Doors in Protein Crystallization: TELSAM Fusions with Two pH Triggers. To Be Published

Release Date

2025-10-01

Peptides

Transcription factor ETV6,DARPin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription factor ETV6,DARPin