SMTL ID : 9q9o.3 (3 other biounits)

TRIM21 PRYSPRY bound to compound 36

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

monomer

Ligands

1 x 01: 4-[[[4-imidazol-1-yl-3-[1-[(4-methoxyphenyl)methyl]-3-methyl-pyrazol-4-yl]phenyl]methylamino]methyl]-~{N}-methyl-benzamide

01.1: 14 residues within 4Å: Chain A: Y.51, P.52, M.53, D.78, F.92, L.93, L.94, W.104, W.106, E.112, Q.118, S.170, G.172, F.173 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.51, A:L.93, A:W.104, A:W.104, A:W.106, A:F.173 Hydrogen bonds: A:L.94, A:S.170 pi-Stacking: A:Y.51, A:W.104, A:W.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luptak, J. et al., Development of TRIM21 PROTAC molecules. To Be Published

Release Date

2025-10-08

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

E3 ubiquitin-protein ligase TRIM21

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