SMTL ID : 9qf1.1

Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

1 x 01: ~{N}-methyl-~{N}-[(1~{R})-1-pyridin-2-yl-3-pyrrolidin-1-yl-propyl]-5-[4,5,6,7-tetrakis(fluoranyl)-1~{H}-indol-3-yl]-1,3,4-oxadiazol-2-amine

01.1: 11 residues within 4Å: Chain A: N.16, F.19, Y.31, N.47, L.50, V.76, K.77, F.80, F.113, D.116, I.117 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.19, A:N.47, A:L.50 Hydrogen bonds: A:K.77 pi-Stacking: A:F.80, A:F.113

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.66, L.82, Q.86, E.94, N.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.86, A:N.98 Water bridges: A:N.98 Salt bridges: A:R.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lucas, S.C.C. et al., Discovery of Small-Molecule Ligands for the E3 Ligase STUB1/CHIP from a DNA-Encoded Library Screen. Acs Med.Chem.Lett. (2025)

Release Date

2025-08-27

Peptides

E3 ubiquitin-protein ligase CHIP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase CHIP

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