SMTL ID : 9qlm.1

Solution structure of the TAF3-PHD bound to a H3K4me3Q5ser histone tail peptide with a serotonylated glutamine

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 7 residues within 4Å: Chain A: C.36, D.38, C.39, Y.43, C.62, K.64, C.65 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.36, A:C.39, A:C.62, A:C.65 ZN.2: 4 residues within 4Å: Chain A: C.21, C.24, H.44, C.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.24, A:H.44, A:C.47

1 x SRO: SEROTONIN(Covalent)

SRO.3: 10 residues within 4Å: Chain A: S.31, P.32, W.45, P.46, M.51, A.52 Chain B: E.5, A.7, S.10, G.12 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.32, A:P.32, A:W.45 Hydrogen bonds: A:M.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pulido-Cortes, L. et al., Molecular determinants for recognition of serotonylated chromatin. To Be Published

Release Date

2025-05-14

Peptides

Transcription initiation factor TFIID subunit 3: A
Histone H3.1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcription initiation factor TFIID subunit 3

Histone H3.1

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