SMTL ID : 9qyu.1

Crystal structure of leaf branch compost cutinase quintuple variant ICCG L50Y

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: S.1, N.2, Q.5, N.231, D.232, T.233 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.2, A:Q.5, A:T.233, A:T.233 Water bridges: A:Q.5 EDO.2: 4 residues within 4Å: Chain A: G.92, P.93, D.94, S.95 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.92, A:D.94, A:S.95 EDO.3: 4 residues within 4Å: Chain A: E.173, E.201, C.248, D.249 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.173, A:E.173, A:D.249 Water bridges: A:D.249 EDO.4: 4 residues within 4Å: Chain A: T.47, S.48, R.118 Ligands: EDO.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.47, A:R.118, A:R.118 EDO.5: 3 residues within 4Å: Chain A: S.88, F.90, D.91 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.88, A:D.91, A:D.91 Water bridges: A:S.95 EDO.6: 3 residues within 4Å: Chain A: A.117, R.118 Ligands: EDO.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.118, A:R.118

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 3 residues within 4Å: Chain A: R.30, V.33, F.36 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Walla, B. et al., Application of a Rational Crystal Contact Engineering Strategy on a Poly(ethylene terephthalate)-Degrading Cutinase. Bioengineering (Basel) (2025)

Release Date

2025-07-02

Peptides

Leaf-branch compost cutinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Leaf-branch compost cutinase