SMTL ID : 9rv5.1

Crystal structure of SPSB2 SPRY domain in complex with linear TAT peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

hetero-2-2-mer

Ligands

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 8 residues within 4Å: Chain A: L.31, R.164, L.166, A.179, I.180, G.181, G.182, T.183 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.179 Hydrogen bonds: A:G.182, A:T.183 Salt bridges: A:R.164 ACT.2: 3 residues within 4Å: Chain A: D.37, L.38, G.39 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:D.37, A:L.38 Hydrogen bonds: A:L.38, A:G.39 Water bridges: A:R.42 ACT.3: 9 residues within 4Å: Chain C: M.23, L.31, R.164, L.166, A.179, I.180, G.181, G.182, T.183 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:A.179 Hydrogen bonds: C:G.182, C:T.183 Salt bridges: C:R.164

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain C: E.59, L.62, Y.63, R.211 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lenz, C. et al., Crystal structure of SPSB2 SPRY domain in complex with linear TAT peptide. To Be Published

Release Date

2025-08-06

Peptides

SPRY domain-containing SOCS box protein 2: AC
Tat Peptide: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

SPRY domain-containing SOCS box protein 2

Tat Peptide

Related Entries With Identical Sequence