SMTL ID : 9s36.1

Cryo-EM structure of Candida albicans Vrg4 bound to an inhibitory nanobody and GDP-Mannose.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GDD: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE(Non-covalent)

GDD.1: 8 residues within 4Å: Chain A: M.37, R.196, K.200, S.259, I.262, Y.278, K.323, Q.327 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.196, A:R.196, A:Y.278, A:K.323, A:Q.327 Salt bridges: A:R.196, A:R.196

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newstead, S. et al., Structural basis for transport and inhibition of nucleotide sugar transport in pathogenic fungi. Res Sq (2025)

Release Date

2025-09-03

Peptides

GDP-mannose transporter: A
lama nanobody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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GDP-mannose transporter

lama nanobody

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