SMTL ID : 9s70.1

Crystal structure of RXR alpha LBD bound to a partial agonist 21 and a coactivator fragment SRC1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 01: 3-[[4-cyclobutyl-6-(3,4-dihydro-2~{H}-quinolin-1-yl)pyrimidin-2-yl]amino]propanoic acid

01.1: 16 residues within 4Å: Chain A: I.41, A.44, A.45, Q.48, W.78, N.79, L.82, I.83, F.86, R.89, I.97, L.99, A.100, V.115, C.205, L.209 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Q.48, A:W.78, A:N.79, A:L.82, A:I.83, A:F.86, A:F.86, A:I.97, A:V.115, A:V.115, A:L.209 Hydrogen bonds: A:A.100 Water bridges: A:F.86 Salt bridges: A:R.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Morozov, V. et al., Crystal structure of RXR alpha LBD bound to a partial agonist 21 and a coactivator fragment SRC1. To Be Published

Release Date

2025-10-29

Peptides

Retinoic acid receptor RXR-alpha: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Retinoic acid receptor RXR-alpha

Nuclear receptor coactivator 1

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