SMTL ID : 9swj.1

Human ADP-forming succinyl-CoA ligase complex SUCLG1-SUCLA2 bound to coenzyme A

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.70 Å

Oligo State

hetero-4-4-mer

Ligands

4 x COA: COENZYME A(Covalent)

COA.1: 19 residues within 4Å: Chain A: Q.20, G.21, T.23, G.24, K.25, Q.26, P.47, Y.78, V.79, P.80, P.81, A.87, I.102, T.103, E.104, N.130, C.131 Chain B: G.322, I.353 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Q.26, A:T.103, A:E.104 Hydrogen bonds: A:T.23, A:T.23, A:K.25, A:Q.26, A:E.104, B:G.322 COA.2: 19 residues within 4Å: Chain C: Q.20, G.21, T.23, G.24, K.25, Q.26, P.47, Y.78, V.79, P.80, P.81, A.87, I.102, T.103, E.104, N.130, C.131 Chain D: G.322, I.353 9 PLIP interactions: 8 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: C:Q.26, C:T.103, C:E.104 Hydrogen bonds: C:T.23, C:T.23, C:K.25, C:Q.26, C:E.104, D:G.322 COA.3: 19 residues within 4Å: Chain E: Q.20, G.21, T.23, G.24, K.25, Q.26, P.47, Y.78, V.79, P.80, P.81, A.87, I.102, T.103, E.104, N.130, C.131 Chain F: G.322, I.353 8 PLIP interactions: 7 interactions with chain E, 1 interactions with chain F Hydrophobic interactions: E:Q.26, E:T.103, E:E.104 Hydrogen bonds: E:T.23, E:T.23, E:K.25, E:Q.26, F:G.322 COA.4: 19 residues within 4Å: Chain G: Q.20, G.21, T.23, G.24, K.25, Q.26, P.47, Y.78, V.79, P.80, P.81, A.87, I.102, T.103, E.104, N.130, C.131 Chain H: G.322, I.353 8 PLIP interactions: 7 interactions with chain G, 1 interactions with chain H Hydrophobic interactions: G:Q.26, G:T.103, G:E.104 Hydrogen bonds: G:T.23, G:T.23, G:K.25, G:Q.26, H:G.322

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bailey, H.J. et al., Human ADP-forming succinyl-CoA ligase complex SUCLG1-SUCLA2 bound to coenzyme A. To Be Published

Release Date

2025-10-22

Peptides

Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial: ACEG
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial: BDFH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

C
A

E
E

G
G

B
D

D
B

F
F

H
H

Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial

Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial