SMTL ID : 9u3p.1

Cryo-EM structure of human AC9-Gs complex (soluble domain)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 2.65 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)

GSP.1: 29 residues within 4Å: Chain B: A.48, G.49, E.50, S.51, G.52, K.53, S.54, T.55, D.173, C.174, L.198, R.199, C.200, R.201, V.202, L.203, T.204, V.224, G.225, G.226, Q.227, N.292, K.293, D.295, L.296, C.365, A.366, V.367 Ligands: MG.2 23 PLIP interactions: 23 interactions with chain B Hydrogen bonds: B:E.50, B:S.51, B:G.52, B:K.53, B:K.53, B:K.53, B:S.54, B:T.55, B:T.55, B:L.198, B:R.201, B:V.202, B:T.204, B:G.226, B:N.292, B:K.293, B:K.293, B:A.366, B:V.367 Salt bridges: B:K.53, B:D.173, B:D.295 pi-Cation interactions: B:K.293

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain B: S.54, T.204, D.223, V.224 Ligands: GSP.1 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:S.54, B:T.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nomura, S. et al., Activation mechanism of human adenylyl cyclase 9 observed by cryo-electron microscopy. To Be Published

Release Date

2025-06-11

Peptides

Adenylate cyclase type 9,Protein M2-1: A
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Adenylate cyclase type 9,Protein M2-1

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

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