SMTL ID : 9uav.1

Cryo-EM structure of HRD1-SEL1L-XTP3B (state D2) complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.70 Å
Oligo State
hetero-2-2-2-mer
Ligands
2 x ALA- ASN- ALA: ALA-ASN-ALA(Non-functional Binders)
2 x NAG- NAG- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-4)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Guo, L. et al., Structural insights into the human HRD1 ubiquitin ligase complex. Nat Commun (2025)
Release Date
2025-07-02
Peptides
E3 ubiquitin-protein ligase synoviolin: AB
Protein sel-1 homolog 1: CD
Endoplasmic reticulum lectin 1: EF
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F

E3 ubiquitin-protein ligase synoviolin

Toggle Identical (AB)

Protein sel-1 homolog 1

Endoplasmic reticulum lectin 1