SMTL ID : 9ufi.1 (1 other biounit)

Crystal structure of a PhGs rhamnosyltransferase UGT79G15 from Rehmannia glutinosa in complex with UDP and FSA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

1 x 01: Forsythiaside A

01.1: 18 residues within 4Å: Chain A: W.16, A.18, H.21, A.81, I.84, D.85, I.86, K.89, F.119, I.140, C.144, M.145, I.149, F.190, Y.195, F.200, I.204, L.374 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:A.81, A:I.86, A:K.89, A:I.140, A:I.140, A:F.190, A:F.190, A:F.200, A:F.200 Hydrogen bonds: A:H.21, A:H.21, A:I.149, A:Y.195 Water bridges: A:M.145, A:I.149, A:A.375

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 12 residues within 4Å: Chain A: G.275, S.276, Q.277, W.334, V.335, Q.337, H.352, G.354, F.355, G.356, S.357, E.360 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.276, A:Q.277, A:V.335, A:V.335, A:Q.337, A:G.356, A:S.357, A:E.360 Water bridges: A:F.355, A:F.355 Salt bridges: A:H.352, A:H.352

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, R. et al., Structural insights into the catalytic mechanism of the phenylethanoid glycoside rhamnosyltransferase UGT79G15 from Rehmannia glutinosa. Plant Commun. (2025)

Release Date

2025-10-08

Peptides

UGT79G15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UGT79G15

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