SMTL ID : 9v0k.2 (1 other biounit)

UBR box of human UBR1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.18, D.20, C.21, V.38, H.39, H.42 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:H.39, A:H.42 ZN.2: 5 residues within 4Å: Chain A: C.5, C.33, C.57, C.69, H.72 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.33, A:C.57, A:C.69, A:H.72 ZN.3: 7 residues within 4Å: Chain A: C.5, R.7, C.30, C.33, C.55, C.57, H.72 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.30, A:C.33, A:C.55

2 x K: POTASSIUM ION(Non-covalent)

K.4: 3 residues within 4Å: Chain A: Q.35, D.36, K.40 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.36 K.5: 3 residues within 4Å: Chain A: V.28, F.54, D.56 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:F.54, A:D.56, A:D.56, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S.H. et al., Crystal structure of human UBR1 UBR box. To Be Published

Release Date

2025-06-04

Peptides

E3 ubiquitin-protein ligase UBR1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase UBR1

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